Gene Mkms_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2400 
SymbolaroK 
ID4613223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand+ 
Start bp2517999 
End bp2518706 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content74% 
IMG OID639792069 
Productshikimate kinase 
Protein accessionYP_938388 
Protein GI119868436 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0971022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC GGGCAGTACT GGTCGGCCTG CCCGGGTCGG GCAAGTCGAC CATCGGCCGT 
CGCCTCGCCA AGGCGCTGGG GCTGACGCTG CTCGACACCG ACGCCGCGAT CGAGGAGACC 
ACCGGGCGCA CGATCGCCGA CATCTTCGCC ACCGACGGTG AGCAGGAGTT CCGGCGTATC 
GAGGAGGAGG TCATCCGCTC GGCGCTGCAG ACCCACGACG GTGTGCTCTC GCTCGGCGGC 
GGGGCCGTCA CCACCCCGGG TGTGCGCGAT GCGCTGGCCG GGCACACCGT GATCTACCTG 
GAGATCAGCG CCGCCGAAGG GGTGCGCCGC ACCGGCGGCA GCACCGTCCG TCCGCTGCTC 
GCCGGACCCG ACCGCGCCGA GAAGTACAAG GCCCTGATGG ACGCCCGCGT CCCGCTGTAC 
CGGCGGGTGG CCACCATGCG GGTGAACACC AACCGGCGTA ATCCCGGCGC CGTGGTCCGC 
CACATCGTCG CCCGGCTCGA GAAGTCCGCT CCGCGGGCCG AGGCGGCCAC CCCCGCGCCG 
CCCACGCCGA ACCGGCCGCG GCGCCGTCGT CGCCCACCGT GGCGGCGTGA CGCCGCGAAG 
GACCAGCAGG AGTCCGACGG CCCGCCGACG CCCGCGATCA TGGCCGCCCG CGCGGCGGAG 
CGGGCATCGG ATCCCCATCG CGATACGACC CTGGAGAAGA ACACGTGA
 
Protein sequence
MAPRAVLVGL PGSGKSTIGR RLAKALGLTL LDTDAAIEET TGRTIADIFA TDGEQEFRRI 
EEEVIRSALQ THDGVLSLGG GAVTTPGVRD ALAGHTVIYL EISAAEGVRR TGGSTVRPLL 
AGPDRAEKYK ALMDARVPLY RRVATMRVNT NRRNPGAVVR HIVARLEKSA PRAEAATPAP 
PTPNRPRRRR RPPWRRDAAK DQQESDGPPT PAIMAARAAE RASDPHRDTT LEKNT