Gene Mkms_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2109 
Symbol 
ID4613468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2232481 
End bp2233179 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content69% 
IMG OID639791774 
Productcobalamin (vitamin B12) biosynthesis CbiM protein 
Protein accessionYP_938097 
Protein GI119868145 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0310] ABC-type Co2+ transport system, permease component 
TIGRFAM ID[TIGR00123] cobalamin biosynthesis protein CbiM 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.494306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0409829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTCG ACCACGTCGC CATGCACATG AGCGACGGTA TCGTCAACGC GCCGACGTCG 
CTGCTATTCG GCGCGATAGC CGTTGCCGCG CTTGGATTTT GCGTCATCCG TGCGAGATCC
GAACTCGACG AGCGCGCGGT ACCCCTCGCC GGCCTCGTCG CGGCGTTCAT CTTCGCCGTG
CAGATGGTGA ACTTCCCGAT CCTGCCCGGC GTCAGCGGTC ACCTGCTGGG TGGGGCGCTG
GCCGCGATCC TCGTCGGCCC CTTCACCGGT GCCCTGTGCA TCGCGCTCGT GTTGACGGTG
CAGGCGCTGC TGTTCGCCGA CGGTGGGATC ACCGCTCTGG GCGCCAACAT CACCAACATG
GCGGTGATCG GCGTGGCCGC CGGTTACGGC ACCGCGGTGC TGCTCTACGC GTTCGTCCGG
CGCAGGGCCC GGGTGCCGGT GACGGCCGTC GGCGTCGTCG CATTCGTCGC CGCCCTGATC
GGAACTCTCT GCGCAGCAAT GGGTTTCGTG CTCGAATACA GCATCGGTGG CGCGGCGCCC
GCGTCGCTGG GTGCGGTGCT GGCCTACATG GGCGGCACCC ACGCTCTGAT CGGGGTGGGG
GAGGGCGTCA TCACCGCCCT CACGGTGGTG GCCGTCGCAC GCGTGCGCCC GGATCTGGTG
TACCTGATGC GCAGCACGCG GGCCGAGGTG CCGGTATGA
 
Protein sequence
MNVDHVAMHM SDGIVNAPTS LLFGAIAVAA LGFCVIRARS ELDERAVPLA GLVAAFIFAV 
QMVNFPILPG VSGHLLGGAL AAILVGPFTG ALCIALVLTV QALLFADGGI TALGANITNM
AVIGVAAGYG TAVLLYAFVR RRARVPVTAV GVVAFVAALI GTLCAAMGFV LEYSIGGAAP
ASLGAVLAYM GGTHALIGVG EGVITALTVV AVARVRPDLV YLMRSTRAEV PV