Gene Mkms_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2018 
SymbolrnhB 
ID4613584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2138095 
End bp2138814 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content71% 
IMG OID639791684 
Productribonuclease HII 
Protein accessionYP_938007 
Protein GI119868055 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGCGT CATGGCCGCC CCGCACGGTG ATCCGCAAGG CCTCCGGCCT GCGAACCCTC 
GAGTCCGCGC TGTACCGCAA CGGGCTCGGA CCGGTGGCCG GGGTGGACGA GGTGGGCCGC
GGGGCCTGCG CGGGCCCGCT GGTGGTCGCG GCGTGCGTCC TCGGCCCGAA CCGGTTGGAG
AGCCTCGCCG CGCTCGACGA TTCGAAGAAG CTCGGTGAGA AAGAGCGTGA GCGGCTGTTC
CCGGTGATCC GTCGCTATGC GCTGGCCTAT CACGTGGTGT TCATCCCGTC CGAAGAGGTG
GACCGCCGCG GTGTGCACGT CGCCAACATC GAGGGCATGC GGCGGGCGGT GGCCGGTCTG
TCGGTGCGGC CGGGTTACGT GCTGTCCGAC GGATTCCGGG TTCCGGGGCT GCCGATGCCG
TCGTTGCCGG TCGTCGGGGG TGACGCCGCG GCCGCCTGCA TCGCGGCGGC CAGCGTGCTG
GCCAAGGTGA GCCGCGACCG GTTGATGGTG GCGATGGAGC GCGAGCATCC CGGCTACGGT
TTCGCCGAGC ACAAGGGGTA CAGCACACCG GCGCACACCG CCGCGCTGGC CGAACTCGGC
CCGTGCGCCC AGCACCGTTA CTCGTTCATC AACGTGCGCC GGTTGGTCAC CGCGGGTACC
CCGCAGATCA GCGGGGGGCT GACCGACGCC GAACCCGGGC AGTGCTGTGA ACTCGGATAG
 
Protein sequence
MPASWPPRTV IRKASGLRTL ESALYRNGLG PVAGVDEVGR GACAGPLVVA ACVLGPNRLE 
SLAALDDSKK LGEKERERLF PVIRRYALAY HVVFIPSEEV DRRGVHVANI EGMRRAVAGL
SVRPGYVLSD GFRVPGLPMP SLPVVGGDAA AACIAAASVL AKVSRDRLMV AMEREHPGYG
FAEHKGYSTP AHTAALAELG PCAQHRYSFI NVRRLVTAGT PQISGGLTDA EPGQCCELG