Gene Mkms_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1800 
Symbol 
ID4613908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand+ 
Start bp1910439 
End bp1911071 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content69% 
IMG OID639791466 
ProductTetR family transcriptional regulator 
Protein accessionYP_937791 
Protein GI119867839 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.865555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.363073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTTCGG CGACCGATCG ACGCCCGGCG CAGCGCAGCG ATCTGCGCCG CGAGGCGATC 
CTCGACGCGC TCGACCGATG GTTGCAGCAG TCGAGCGTGG AGACGGTGAA CATCGCCGAG 
GTGGCGCAGC AGGCCGGCGT GACGCGCTCG GCGTTCTACT TCTACTTCGA GAACAAGGCG 
GCTGCGGTGG CGGCGCTGAC GGAGCGCATC CTCGACGAGA CCATCGCCGT CAACCAGGCA 
CTCACCAGCG CATCGGGTTC GCCCCGGGCC CGCGTTCACA AGATGCTCGC CGGGCTCTTC 
GGCCTGTGCG AGCGTCACCG GCATCTGTTC CAGGCGATGC TCGAGGTGCG TGGGTCCAGC 
CCTGCGGTGC GCTCGATCTG GGACGACGCC CGCGAGTCGT TCGTCGACTC CATCGCCGAG 
CTGATCCGCA CCGAGCGTTC GGCGGGGGTC GCACCCCCCG GCGTCGACGC CCTCGTGTTG 
GCCACCGTGC TGCTCGAGTT CAACGACCGG ATGCTGGAAC GTCTGACCCT CGGCGGACCC 
CTGGCGGCCG ATGAGTTGAG GCACGGGGCG GCGGCGGTAT GGCTGAGTTC GGTCTACGGC 
ATCACCGACC CCGAGGAGCG TCCCGCGACA TGA
 
Protein sequence
MRSATDRRPA QRSDLRREAI LDALDRWLQQ SSVETVNIAE VAQQAGVTRS AFYFYFENKA 
AAVAALTERI LDETIAVNQA LTSASGSPRA RVHKMLAGLF GLCERHRHLF QAMLEVRGSS 
PAVRSIWDDA RESFVDSIAE LIRTERSAGV APPGVDALVL ATVLLEFNDR MLERLTLGGP 
LAADELRHGA AAVWLSSVYG ITDPEERPAT