Gene Mkms_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1754 
Symbol 
ID4613861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1864878 
End bp1865651 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content69% 
IMG OID639791420 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_937746 
Protein GI119867794 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGGG AACATGGGCG CCTCCACGGC AAGTCCGCGG TGATCACCGG GGCGGCGTTC 
GGCATCGGCC GGGCCACCGC CGTGCTCTTC GCACGAGAGG GCGCGCGGCT GGTCGTGACC
GATATTCAGA GCGAGCCGCT GCTGGCGCTT GCCGATGAAC TGCGGCACGC CGGAGCGGAC
GTCGAGCCCG TCGTCGGCGA CGTCTCGGTG GAGTATGACG CGGGGCGGAT GATCGGGGCG
GCGGTCGACC GCTTCGGACG GCTCGATGTG CTGGTCGCCA ACGCAGGCAT CATCCCGCTC
GGCGACGCGC TGGAAATGAC CGCCGCCGGC TGGGACGAAG TGATGGCCAT CGACGGGCGC
GGCATGTTCC TGTGCTGCAA ATTCGCGATC GAGGCGATGT TGCCGACCGG GGGTGGCGCC
ATCGTCTGCC TCTCCTCGAT CTCCGGACTG GCGGGGCAGA AGCGGCAGGC GGCCTACGGT
CCCGCCAAGT TCATCGCCAC CGGCTTGACC AAGCACCTGG CAGTCGAGTG GGCCGACCGG
GGTATCAGAG TCAACGCCGT CGCCCCCGGG ACGATTCGAA CCGAGCGGGT CAAGCGGTTC
CCGGAGGAGC CGGGTGGCTC GGAGTACCTG GCGGCGGTCG AGCGTATGCA CCCGATGGGC
CGCATCGGCG AACCAGCCGA AGTCGCCAGC GCCATCGTCT TTCTCGCCTC CGACGACGCC
TCCTTCATCA CCGGCGCCGT GCTGCCGGTC GACGGGGGAT ATCTAGCGCA GTAG
 
Protein sequence
MTREHGRLHG KSAVITGAAF GIGRATAVLF AREGARLVVT DIQSEPLLAL ADELRHAGAD 
VEPVVGDVSV EYDAGRMIGA AVDRFGRLDV LVANAGIIPL GDALEMTAAG WDEVMAIDGR
GMFLCCKFAI EAMLPTGGGA IVCLSSISGL AGQKRQAAYG PAKFIATGLT KHLAVEWADR
GIRVNAVAPG TIRTERVKRF PEEPGGSEYL AAVERMHPMG RIGEPAEVAS AIVFLASDDA
SFITGAVLPV DGGYLAQ