Gene Mkms_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1726 
Symbol 
ID4613833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1841991 
End bp1842854 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID639791392 
Productprotocatechuate 3,4-dioxygenase, beta subunit 
Protein accessionYP_937718 
Protein GI119867766 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3485] Protocatechuate 3,4-dioxygenase beta subunit 
TIGRFAM ID[TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTC CGCTCAGTGG AATTCTACCG TTCGCCAATC TCAACGTCGT CGGTACCGTA 
GGCGCCGTGA CAACGTCGAT CGACAGCAAT CCCGACGGCG CCGTAGCGAG CCAGTCGGAG
ATCAGCGCGG AGATCGGTGC GATCGAGTCC GCCTACCAGC GTGCAGGGGT CGAGGAGACG
CAGCCGCGCC TGAGTTATCC GCCTTACCGG AGCAGCCTGC TACGGCATCC GACAAAGGAC
CTTCACCACG CCGACCCGGA AGGGGTCGAG CTATGGACGC CGTGCTTCTC CGAACGCGAC
GTTCACCCGC TGGAGGCCGA CCTCACCGTC CAGCACTCGG GTGAACCCAT CGGTGAACGA
CTGGTGGTGA CCGGCAGGGT CGTCGACGGC GCAGGGCGGC CGGTGCGGCG CCAGCTCGTC
GAGATTTGGC AGGCCAACGC CGGCGGACGT TACATCCACA AGGGGGATCA GCACCCGTCC
CCAATCGACC CCAACTTCAC CGGCGCCGGC CGCTGTTTGA CCGACGAGGA CGGCATCTAC
CGGTTCACCA CGATCAAGCC GGGGCCGTAT CCGTGGAAGA ACCACCGCAA CGCGTGGCGG
CCCGCACACA TCCACTTCTC GCTCTTCGGC ACGGAATTCA CGCAGCGAAT GGTCACCCAG
ATGTACTTCC CGGGTGACCC GCTCCTCTGC CTTGATCCGA TCTTCCAGGC GATCCCGGAT
CAGAAGGCGC GCAGCCGGCT GGTGGCCAGC TACGATCACG AACTCAGCAC CCACGAATGG
GCTACCGGCT ACCGATGGGA CGTCGTCCTG ACCGGGTCGG CGCGCACCCC AATCGAGAAC
CTCGGCCGCG GAGCCCACCG CTGA
 
Protein sequence
MAFPLSGILP FANLNVVGTV GAVTTSIDSN PDGAVASQSE ISAEIGAIES AYQRAGVEET 
QPRLSYPPYR SSLLRHPTKD LHHADPEGVE LWTPCFSERD VHPLEADLTV QHSGEPIGER
LVVTGRVVDG AGRPVRRQLV EIWQANAGGR YIHKGDQHPS PIDPNFTGAG RCLTDEDGIY
RFTTIKPGPY PWKNHRNAWR PAHIHFSLFG TEFTQRMVTQ MYFPGDPLLC LDPIFQAIPD
QKARSRLVAS YDHELSTHEW ATGYRWDVVL TGSARTPIEN LGRGAHR