| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_1640 |
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| Symbol | |
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| ID | 4613927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. KMS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008705 |
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| Strand | + |
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| Start bp | 1754483 |
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| End bp | 1756828 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639791311 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_937637 |
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| Protein GI | 119867685 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.27346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCTGGC GTGGCATCAT GGGGTGGTTG CCAGCAAACT GCGGGGGGTC TGTGTCGGTC
AAGAGTGCGC AGTGGCGGCT GATGGTATTT GCTGTCGTCG CGGTCCTGGC GTGGGTGAAC
GCGCTGGCAA TTTTCGGCGA CGATGTCGCG CGGCGGGTGG CGGTGGTGCT GCAGGCGACG
GCGGGCGTAT CGGCGCTGGT CGCCGCGGTG CTGGTGGCGC GGAAGTCAGC CGGGGTCGCG
CGGTGGTGGC GCTTGCTCGT GATCGCGGCG ATGGGCAGTT GGCTGGTCGC CGAGATGGTG
TGGTTCTTCG GTGGTGCCGG CCGCGGCGGT GACGAGGCTC ATCCGGTAGC TGTCGTCGCC
TACTTCCTGC CGCCGGTGCT GTCCCTGGCC GCGATGGTCG TTCTCGCCCG CGGCGGCGGT
GGGTTGCGCG GCCGCCACAG CGGATTGCGT CATTCGCGGG TCGTCGCGGT GCTCGACGGG
TTGGTGGCGG CGTCGGCCTT CTCGATCCTG GCGTTCATCG CCGGTCTCGG CGCGATGACG
GGTGCCGCGC TGCCCCGTTC CCAGAGCGTG CCCGTCGTGG TCGCCTACTC GCTGCTGGAA
GTGGTCGTCG TGGTGGTCGC GGCGCTGATG GCGATGGCGT ACCGGCGCGA CCGGCCCGAT
CGCGTGAACT ACCTGCTCCT CTCGGGCGGG GTGCTGACGA TCGCGGCGTC GGATCGGTTG
ATCGCCTATC TGCGCACCGT CGGTGCGGAG TCGGGCGACC TGTGGGCCGG TGTCGGCTTC
ACTCTGGGGC CGCTCATCAT CGCGTTCGCG GTGCTGGAAG TACGACCGAA GCCAGTGACC
GGCCGCGGTG AGGACGCGAT GGACTGGTTG CAGGCGTTCC TGCCCTACAT CGGGTTCCTG
TGCATCATCG GGTTGCTGTC CTACCACCTG CTGATCGGCC GGGATATGCC CAAGCTGGTG
ATCGCGGTGG CGGTGGTGAT GATCGCGCTC GTCACCGCGC GACAGGTGGT CGCGATGCGG
GCCCAGCGAC TGGTGACCAA CCAGCTCTAC GAGGCGCAAC GCCGGCTCGC ACACCAGGTG
CACCACGACC CGCTCACCGG ACTGCCCAAC CGGGTGTTGT TCGCCAAACG GCTCGACGAG
GCCATGCACG ACGGGAAGTT CGTGCTGATC TTCGTCGACA TCGACGACTT CAAAGAGGTC
AACGACCAGT TCGGCCATGC GGCGGGCGAC GATCTGCTCT GCGCGGTGGG CGAGCGGCTG
CGCCGGTGCG TCGGACCGTC GGACACTCTG GCCCGCATCG GCGGCGACGA GTTCGCGATC
CTGGTCGAGG GCGAACACGA TGCGCCCGAG GTCGTCGCCG ACAAGCTGCG GGTGGCGCTG
CGGGATCCGT TCGCGGTGCA CGGCTCGTCG GTGCGCGTGC GCGCGAGTAT GGGACTGGTC
CGGCCCTCGG TCGACGAACC GAACCCGACG TCGGACGATC TGCTGCGCCA AGCCGACATC
TCGATGTACG CAGGCAAGCG ACTGGGCAAG GACACCGCGG TGGTCTACCG GCCGTCCTCG
GGTGTCTCGG TCGACTTCCC CAGTGCGCTA CGGCAGGCGG ACGGCGGGGT GCCGAAGGGG
TTTACCCTGG CGTATCAGCC GGTGGTCACC CTTCCGCACG CTGCGCCGGT CGCTGTCGAA
GCGTTGGCGA GATGGACCGC GCCGAATGGG ATGCAGATCT CGCCGGAGAC CTTCGTCGCG
GTAGCGGAAG GCGCCGGTCT GGGTGGGGCG CTCGACGCGA TGGTGCTGGA CCTGGCGTGT
CGCGAGATGG AGGCGGCCGG ACTCGACGTC GCCCTGCACG TCAACATCGG CGCGGCGCGG
CTGGGCAACC GCGGATTCGA ACAGCAGGTG GTGCGGACAC TCGAGCGGCA CGGCATCGAA
CCGGAGCGGC TGGTCCTCGA GATCACCGAG ACCGTCCCGA TCGTCGACCT GGCGAAGGGT
GCGGCGGCCA TCCGGCGGCT GCGCTCGTTC GGCGTGCAGG TCGCGCTGGA CGATTTCGGC
GCGGGCTTCA ACTCGCTCAA CTATTTGCAC GCACTGCCGA TCGACGTGGT GAAACTGGAC
CGCAGCCTCG TCGTCGGCGG CGAACCCGAC CGCGACGTGG CGCTCTACCG GTCGGTGATC
GGGCTGTGCG ATGCGCTGGG ACTCGACGTG ATCGCCGAGG GGATCGAGTA TCCCGAGCAG
GCCGATACGG TGTTCGCCGC GGGATGCCGG ATGGCCCAGG GGCACCTGTT CGGACGCGCG
GTGCCGCTGA GCGAACTCGG CCGGGTGCTG TCCGCCGCGT GGGAAGAGGC CGTTCCCCGC
CCGTGA
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| Protein sequence | MCWRGIMGWL PANCGGSVSV KSAQWRLMVF AVVAVLAWVN ALAIFGDDVA RRVAVVLQAT
AGVSALVAAV LVARKSAGVA RWWRLLVIAA MGSWLVAEMV WFFGGAGRGG DEAHPVAVVA
YFLPPVLSLA AMVVLARGGG GLRGRHSGLR HSRVVAVLDG LVAASAFSIL AFIAGLGAMT
GAALPRSQSV PVVVAYSLLE VVVVVVAALM AMAYRRDRPD RVNYLLLSGG VLTIAASDRL
IAYLRTVGAE SGDLWAGVGF TLGPLIIAFA VLEVRPKPVT GRGEDAMDWL QAFLPYIGFL
CIIGLLSYHL LIGRDMPKLV IAVAVVMIAL VTARQVVAMR AQRLVTNQLY EAQRRLAHQV
HHDPLTGLPN RVLFAKRLDE AMHDGKFVLI FVDIDDFKEV NDQFGHAAGD DLLCAVGERL
RRCVGPSDTL ARIGGDEFAI LVEGEHDAPE VVADKLRVAL RDPFAVHGSS VRVRASMGLV
RPSVDEPNPT SDDLLRQADI SMYAGKRLGK DTAVVYRPSS GVSVDFPSAL RQADGGVPKG
FTLAYQPVVT LPHAAPVAVE ALARWTAPNG MQISPETFVA VAEGAGLGGA LDAMVLDLAC
REMEAAGLDV ALHVNIGAAR LGNRGFEQQV VRTLERHGIE PERLVLEITE TVPIVDLAKG
AAAIRRLRSF GVQVALDDFG AGFNSLNYLH ALPIDVVKLD RSLVVGGEPD RDVALYRSVI
GLCDALGLDV IAEGIEYPEQ ADTVFAAGCR MAQGHLFGRA VPLSELGRVL SAAWEEAVPR
P
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