Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_1549 |
Symbol | |
ID | 4614018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 1667339 |
End bp | 1668655 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639791222 |
Product | virulence factor Mce family protein |
Protein accession | YP_937548 |
Protein GI | 119867596 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.427862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCCT TCGCCGAACG CAATCCCTTC GTCATCGGCC TGGCGGGCAT CACGGTGACG GCCGGTATCG CGGTGATCGC GCTGCAGTAC GACAAACTGC CGTTCAGCAC GTCCGACAAC GACTACTCGG CATACTTCGC GGAAGCCGGT GGTCTGCAGG CCGGGGCGCC CGTGCAGGTC GCCGGTTTCC GCGTGGGCCA GGTGTCAGCG GTCGAACTCG ACGGCACCCG GGTGCTGGTC GACTTCGACG TCGACGAGAA CGTGCATCTC GGTGAGCTGA CCGAAGCGCA CATCAGAACG AAGAGCCTGC TCGGTTCCAA GGTCCTCGAG GTCACACCGC GCGGCGACGG TGACCTGACC TCGACCATCC CCCTGGAGCG GACGCGGTCG CCCTACCAGC TCCCCGATGC GCTGGGCGAC CTGTCGACGA CCATCAGCGG CCTGAACACC GACACGGTCT CCGCCGCTCT GGCGACACTG GCCGACACCT TCCAGAACAC GCCGCCCGAC CTCCGGGCGG CGGTCGAGGG CGTCGGCAGG TTCTCTCAGA CTCTCGGCGA ACGCGACGCC GAGCTGCGAA ACCTGTTGAG CAACGCCAGT AAAGCCACGG GGGTGCTGTC CCAGCGCGCC GACGAGGTCG CCAAGCTGGT GGCGGACAGC AATGCCCTGC TGGCGGCCCT GCGAGAGCAG AGCACCGCGC TGGAGCAGAT CTCCCGCAAC CTCTCCGCAT TCGCGACCCA GCTCGGTGCC TTCATCGCCG AGAACCGGGA GCAGATGCGT CCTGCGCTGG ACAAACTGAA CGGTGTTCTG ACGATCGTCG ACAACCGCAA GGAACGCATC ATGTTGGCGA TCAAATACCT CAACCAGTAC ACGATGGGGC TGGGGGAGAC GGTCGGCTCC GGTCCGTTCT TCAAGGCGTA CCTGGCGAAT CTGCCCGGCC AGCTGGTCCA GCCCTTCATC GACGCGGCCT TCTCCGACCT CGGTCTCGAC CCGAACGTGC TGCCCCCGTC GCAACTGTCC GATCCGCAGA CCGGGCAGCC TGCGACACCG GCGCTGCCCG TTCCGTTCCC GCGCACCGGC CAGGGAGGCG AACCACGTCT CACCCTTCCC GATGCGATCA CCGGTAACCC GGGCGATCCG CGCTACCCCT ACCGGGAACC GCTGCCCGCA CCGCCTCCTG GCGGGCCGCC CCCTGGACCG CCCGCACCGT GGCCGACAGG TCAACAGCCC ACGGCTCAAC CGACCCCGTC GCCGGTGTTC GAGCCGGCTC CGGGCGAACC CACGGCCGCG CCCGAACCCG TGAACGGAGG GCAGTGA
|
Protein sequence | MKPFAERNPF VIGLAGITVT AGIAVIALQY DKLPFSTSDN DYSAYFAEAG GLQAGAPVQV AGFRVGQVSA VELDGTRVLV DFDVDENVHL GELTEAHIRT KSLLGSKVLE VTPRGDGDLT STIPLERTRS PYQLPDALGD LSTTISGLNT DTVSAALATL ADTFQNTPPD LRAAVEGVGR FSQTLGERDA ELRNLLSNAS KATGVLSQRA DEVAKLVADS NALLAALREQ STALEQISRN LSAFATQLGA FIAENREQMR PALDKLNGVL TIVDNRKERI MLAIKYLNQY TMGLGETVGS GPFFKAYLAN LPGQLVQPFI DAAFSDLGLD PNVLPPSQLS DPQTGQPATP ALPVPFPRTG QGGEPRLTLP DAITGNPGDP RYPYREPLPA PPPGGPPPGP PAPWPTGQQP TAQPTPSPVF EPAPGEPTAA PEPVNGGQ
|
| |