Gene Mkms_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1440 
Symbol 
ID4614272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1549290 
End bp1550471 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content60% 
IMG OID639791116 
Productphage integrase family protein 
Protein accessionYP_937442 
Protein GI119867490 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGAAG CCGATGAGGG TCGCGTCGTC CGACCATCCA CGCGTACGGT GACTCAGTTT 
CTGGACGAAT GGTTCACCGC CGTTGAGGCA TCACTCGACG CGACGACTTG GCAGAATTGG
AAGGACTATG CGAAAAGCTA CGTCGTGCCG CATATCGGGA ACGTAAAGCT TCAGCAGCTC
GATGAGCCAG AGCTGCTGCG GCTTTACGCG AAGTTGCTGA CCGAAGGTCG GATCAAGCAA
GACCGAAACT ACGAAATGTA CTGCTATTGG CGTCGCCATG CGATCGACGG GGAGTCGCCG
GCGCCGCGCG AAGTCGCTGA CGCCTGCGGC ACAACGATTC ACGCCGCTCG CGCCGCTGTT
CGGCGATACA AGAGCGGCAT ACTCCCGACA AAGATGGATC CCGGACTTGC TCCAAAGACC
GTTCGAAACA TTCACGCCAT GATCCATCGA GCGATGGCCG ATGCCGTCGC GTGGAAGTAC
AAGGCTCACA ATCCCGCGGC GAACGTACGG CCACCGAAGC GCTCCCGCTC CCGACGCACC
GTGTGGAACC AAGAGGACAT ACAGAAGTTC CTGCGCGCGG TCAGCCACGA CCGGTTCGCA
TCGCTATTTC TTCTGGAGCT CACGACCGGC ATACGTCGTG GGCAGATCTG CGGCCTTCGA
TGGCACGACG TCGACCTGGA CGTGCGCGAG GTTACGGTGC ACGACAACCG AGTAGTAGTC
GCCGGGCATG CGAGAGACAA AGCCGGCGGC AAGACGCGAA ATGCGGATCA GACCATTGCG
ATAGATCGAG TAACGGCGGC AGCACTTCGA AAGTGGCGTG AGCATCAAAA TGAAGAGCGG
GCGTTCTTCG GTGCCGACTA TCACCCTGGG AACTACGTCT TCACGTTCGA GGATGGGCGG
CCACCGCACC CCGACTCCAT CCGCCAACGA TTCGATCGCC TCGCGGCGGT CGCCGGCCTC
CCACGGATCA CTTTTCACGA TCTCCGACAC TCATACGCGA CAGCAGCCCT CAAGGCCGGG
GTGAATCCCA AGATCGTGAG CGAGCGTATC GGGCACGCGG ACGTCGGTTT CTTTCTGCAA
ACCTACGCTC ACGTCCTCAA GAATGACGAC CGAGACGCTG CCGAGCAGGC GGCAGCGTTC
CTCATCGGAG ATCAGTACGG ATCGTCAGCC ACCTCCGAGT GA
 
Protein sequence
MREADEGRVV RPSTRTVTQF LDEWFTAVEA SLDATTWQNW KDYAKSYVVP HIGNVKLQQL 
DEPELLRLYA KLLTEGRIKQ DRNYEMYCYW RRHAIDGESP APREVADACG TTIHAARAAV
RRYKSGILPT KMDPGLAPKT VRNIHAMIHR AMADAVAWKY KAHNPAANVR PPKRSRSRRT
VWNQEDIQKF LRAVSHDRFA SLFLLELTTG IRRGQICGLR WHDVDLDVRE VTVHDNRVVV
AGHARDKAGG KTRNADQTIA IDRVTAAALR KWREHQNEER AFFGADYHPG NYVFTFEDGR
PPHPDSIRQR FDRLAAVAGL PRITFHDLRH SYATAALKAG VNPKIVSERI GHADVGFFLQ
TYAHVLKNDD RDAAEQAAAF LIGDQYGSSA TSE