Gene Mkms_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1233 
Symbol 
ID4614429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1319260 
End bp1320492 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content73% 
IMG OID639790908 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_937235 
Protein GI119867283 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.849616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCT CACGGAATCT CTCGACGCGC GTCGCGGCGC TGGCCGCGGC GGTGTCGGTG 
CTGATCGCGC CCGCACTGAT CGCGGCGCCG GGGGCCGCGG CGCAGCCCGC ACCCCAGTCC
ACCACCTGCC CGTACCGCGT GACCACGCCG CCGGCCGTCG ACGCCTCCGA AGTGCCCAAG
CCCGGACAGG ATCCGCCCGT CGCGCTGCCG GTGCCCGCCA CCCCGCTCGG CGGTGACGCG
CTGTCCGGAT GCGGCATCAT CACCGCACCG GGCGCCCCGC CCGCGCCCGC CGACGTGTCC
GCCGAGGCGT GGCTGGTGGC CGACATGGAC ACCGGTGAGG TGATCGCCGC GCGCGACCCA
CACGGTCGGC ACCGCCCGGC CAGCGTGATC AAGGTGCTGA TCGCGATCCA GTCGCTCAAG
GAGCTCAACC TCGCCAAGGC CGTGCCGGGC ACCCCCGAGG ACGGCGCCGC CGAGGGCACC
AGCGTCGGCG TCGACGTCGG CGGCCTCTAC ACCGTCAACG ATCTGCTGCA CGGGCTGCTG
ATGTACTCCG GCAACGACGC CGCGCACGCC CTGGCGCGGC AACTCGGTGG AATGGACACC
GCGCTGCTCA AGCTCAACCA GCTGGCCGGA AAGCTCGGCG GCCGCGACAC CCGGGTGGCC
ACCCCGTCGG GCCTCGACGG GCCGGGCATG AGCACCTCGG CCTACGACAT CGCGCTGTTC
TACCGGTACG CCTGGCGCAA CCCGACTTTC ACCGAGATCG TCGCCACCCG CACCTACGAC
TTCCCGGGCC GGGACGGCAA CCCGCCCTAC CCGATCGAGA ACGACGTCAA GCTGCTCTAC
AACTATCCGG GCGCCCTCGG CGGTAAGACC GGCTTCACCG ACGACGCCGG ACAGACCTTC
GTCGGTGGCG CCGAGCGCGA CGGCCGCCGC CTGGTGGCGG TGCTGCTGCG CGGCACCCGG
CAGCCGATCG CCCCGTGGGA GCAGGCCGCC CGGCTGCTCG ACTACGGCTT CGGGCTGCCG
CAGGGCACCA AGGTGGGATC GCTGATCGAA CCGGATCCGT CGCTGGACCC GAGTCCGCAG
ACCGCCGAGA CCGAGGCGGC CGCGCAGGCG GCTGCGGTGC TGCCCGCCGC CGACGCCATG
CCCGTGCGGG TCGGGGTGGG CGTGATCGGC AGCATCGTCG TGTTCGCGTT GATGATGGCG
GCCCGCTCGC TCAACCGGCG TCCGCAGAAC TGA
 
Protein sequence
MAASRNLSTR VAALAAAVSV LIAPALIAAP GAAAQPAPQS TTCPYRVTTP PAVDASEVPK 
PGQDPPVALP VPATPLGGDA LSGCGIITAP GAPPAPADVS AEAWLVADMD TGEVIAARDP
HGRHRPASVI KVLIAIQSLK ELNLAKAVPG TPEDGAAEGT SVGVDVGGLY TVNDLLHGLL
MYSGNDAAHA LARQLGGMDT ALLKLNQLAG KLGGRDTRVA TPSGLDGPGM STSAYDIALF
YRYAWRNPTF TEIVATRTYD FPGRDGNPPY PIENDVKLLY NYPGALGGKT GFTDDAGQTF
VGGAERDGRR LVAVLLRGTR QPIAPWEQAA RLLDYGFGLP QGTKVGSLIE PDPSLDPSPQ
TAETEAAAQA AAVLPAADAM PVRVGVGVIG SIVVFALMMA ARSLNRRPQN