Gene Mkms_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1072 
Symbol 
ID4614593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1157257 
End bp1157916 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content70% 
IMG OID639790749 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_937076 
Protein GI119867124 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.562029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0679961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCG GGCCAGTGCG GATCGTCCTG GTCGACGACC ACGAGATGGT CATCGAGGGG 
CTCAAGGCCA TGCTCGCGAC GTACGCCGAC CGGGTCGCGG TGGTGGGACA GGCGGTGGGC
GCCGAACGCG CGATCGGCGT GGTCGCCGAC CTGCGACCGG ACATCGTGCT GTGCGACGTC
CGGATGCAGG GGGCCAGCGG TCTGGACCTG TGCCTGGAGC TGCGCGGGCG CGACCCGGAC
CAGAAGGTGG TGATGCTCTC GGTGTACGAC GACGAGCAGT ACCTGTTCCA GGCGCTGCGG
GTGGGTGCGT CGGGCTACCT GCTCAAGAGC ATCAGCAGTG ACGAGCTGGT CCGCCAGCTC
GAGTTGGCCC ACCGCGGCCA GACCGCCATC GATCCGGGCA TGGCGGCCAG GGCGGTCGAC
ACCGCCGCCC GGCTGCAGCG GGACGAGTTC TGGCCCGGGG CCCGCCAGGG CCTCACCCAG
CGCGAGAGCG AGATCCTGTC GTTCGTCGTG ACCGGGCTGT CGAACCGGGG TATCGCCAAC
AAACTGGTGA TCGGCGAGGA GACCGTGAAG ACCCATCTGC GGTCGATCTA CCGCAAACTC
GGCGTCGGTG ACCGCGCCGG TGCGGTGGCG ACGGCGCTGC GCGAGGGGAT TTACCAGTGA
 
Protein sequence
MTGGPVRIVL VDDHEMVIEG LKAMLATYAD RVAVVGQAVG AERAIGVVAD LRPDIVLCDV 
RMQGASGLDL CLELRGRDPD QKVVMLSVYD DEQYLFQALR VGASGYLLKS ISSDELVRQL
ELAHRGQTAI DPGMAARAVD TAARLQRDEF WPGARQGLTQ RESEILSFVV TGLSNRGIAN
KLVIGEETVK THLRSIYRKL GVGDRAGAVA TALREGIYQ