Gene Mkms_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1023 
Symbol 
ID4614687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand- 
Start bp1116782 
End bp1117444 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content72% 
IMG OID639790700 
ProductAsp/Glu racemase 
Protein accessionYP_937027 
Protein GI119867075 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.493832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.560856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACTGC TCCTGGTGAA CCCGAACACG ACGGCGTCGA TGACCGCCGC GATCGCCGCG 
TCCGCGTCCG CAGTGGCGGA CCCCGGTACG GTCGTCGAGG CGCTCAACCC CACCGACGGC 
CCGTCCAGCA TCGAGAACGA GGCGGACGAA CACCGTTGCG TGCCACACCT TCTCGATGTC 
CTCCGCGACG CGTGTGCGCG CACTCAGAAC CGCCCCGACG CGTACGTGAT CGCGTGTTTC 
GGCGATCCGG GTCTCGACGA GGCGCGGGAG CTGCTCGACG CGCCGGTGCT GGGCATCGCC 
CAGGCGGCCA TGCACGGCGC CGCCCTGCTC GCGGGGACCT TCTCGGTGGT GACGTCGATG 
TCGGCGACCG TGCCCCGTGG ATGGCAGCTC GCCAAGGCCT ACACCCCGAA CGCGTGTCAG 
GGCGTGTACG CCTGCGACAT CCCGGTGCTG CGCATCGACT CCGATCCGGC CACCATCGAG 
CCGATCGCCG ACCTGTGTGC GCACGCGCTG CGGGCGGACG GCAGCCGCTC GATCGTGCTC 
GGTTGCGCCG CGATGGCCCG CTTCGCCGAG CCGCTCTCGC AGCGTCTGGG TGTCCCGGTC 
ATCGACGGCG TCGCGGCCGC CACCCGCCTG GCCGAGGCGT TGACCCCGCT CAGCCCGCGA 
TGA
 
Protein sequence
MRLLLVNPNT TASMTAAIAA SASAVADPGT VVEALNPTDG PSSIENEADE HRCVPHLLDV 
LRDACARTQN RPDAYVIACF GDPGLDEARE LLDAPVLGIA QAAMHGAALL AGTFSVVTSM 
SATVPRGWQL AKAYTPNACQ GVYACDIPVL RIDSDPATIE PIADLCAHAL RADGSRSIVL 
GCAAMARFAE PLSQRLGVPV IDGVAAATRL AEALTPLSPR