| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_0581 |
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| Symbol | def |
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| ID | 4615125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. KMS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008705 |
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| Strand | - |
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| Start bp | 638902 |
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| End bp | 639495 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639790256 |
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| Product | peptide deformylase |
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| Protein accession | YP_936587 |
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| Protein GI | 119866635 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.28634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00744017 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCAGTCG TTCCGATCCG CATCGTGGGA GATCCAGTCC TGCGCACCGA AACCACCCCG
ATCCCCGTCG GCGATGACGG TTCCCTCCCC GCCGAGGTGG CCGATCTCAT CCGCGATCTG
TACGAGACGA TGGACGCCGC CAACGGTGTC GGCTTGGCCG CCAACCAGAT CGGCGTCTCC
CAGCGGGTGT TCGTCTACGA CTGCCCCGAT TCGCGCGGCC GGGCGGGCCG GCGCCGCGGG
GTCGTGATCA ATCCGGTGCT GGAGACGTCC GACATCCCCG AGACCATGCC CGATCCCGAT
GACGACGAAG AGGGCTGCCT GTCGGTGCCC GGCGAGCAGT TCCCCACCGG GCGGGCCGAC
TGGGCGCGGG TGACGGGCCT GGACGCCGAC GGCAGCCCCA TCACCGTCGA GGGCACCGGA
CTGTTCGCGC GGATGCTGCA GCACGAGACG GGCCACCTCG ACGGATTCCT CTACCTCGAC
CGCCTGATCG GTCGGCACGC GCGCGCGGCC AAACGCGCGG TCAAACACAA CGGCTGGGGG
GTGCCCGGGC TGAGTTGGAC GCCGGGCGAG GATCCCGATC CGTTCGGCCA CTGA
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| Protein sequence | MAVVPIRIVG DPVLRTETTP IPVGDDGSLP AEVADLIRDL YETMDAANGV GLAANQIGVS
QRVFVYDCPD SRGRAGRRRG VVINPVLETS DIPETMPDPD DDEEGCLSVP GEQFPTGRAD
WARVTGLDAD GSPITVEGTG LFARMLQHET GHLDGFLYLD RLIGRHARAA KRAVKHNGWG
VPGLSWTPGE DPDPFGH
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