Gene Mkms_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0335 
Symbol 
ID4615218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp370611 
End bp371984 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content68% 
IMG OID639790010 
Productmajor facilitator transporter 
Protein accessionYP_936342 
Protein GI119866390 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.280682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTCC GGCCCACCGG AGCACCGGGG AACGCGAAGA TCGGGGACAT GGACGAGACG 
GCAACTCCTG ATCCGGCGTT GCTGCGCCGG GTCGCGATTT CCAGTCTGCT GGGCACCGCG
ATCGAGTACT ACGACTTTCT CGTCTACGGG ACGATGAGCG CGCTCGTGTT CGGGATCATC
TTCTTCCCCG AATCGGATCC CGCGGTGGCC ACCATCGCCG CGTTCGGCAC GCTCGCCGCG
GGTTACGTCG CCCGGCCGGT CGGCGGAATC CTGTTCGGAC ACTTCGGTGA CCGGATCGGC
CGCAAATCGA TGCTGGTGCT GACGATGACC CTGATGGGCG TCGCGAGCTT CCTCGTCGGC
GTGCTGCCCA CGTTCGCCGC GATCGGGGTC GCGGCACCGA TCCTGCTGGT GGCACTGCGC
GTGATCCAGG GGGTGGCGAT CGGAGGGGAA TGGGGCGGAG CCACCCTGAT GGTCACCGAA
CACGCCGAAC CGCACCGCCG CGGGGCCTGG AACGGTGTCA TGCAGATGGG TTCGCCGATC
GGCTCGCTGC TGTCGGTGGC CGTCGTCACC GCCATCACCC TGATGCCGGA CGAGTCGTTC
ATGTCCTGGG GTTGGCGGGT GCCGTTCCTG GTCAGCCTGC TGCTGCTCGG CCTCGGGATC
TACGTGCGGT TGTCCATCAC GGAAAGCCCC GTGTTCGAGC AGGCGAAACG GGCCGACGAC
CGCCCGCAGG GCCCCCCGCT CGTCGAGGTG CTGCGCCGCC CCGGGAACCT GGTCCTCGCC
TGCGCCGTCG GGATCGGGCC GTTCGCGCTC ACGGCGTTGA TCAGCACCTA CATGATCAGC
TACGCGACGG CGATCGGGTA CCACCGCACG GACGTGATGA CCGCGCTGAT CTTCACGTCG
ACGACGGCGC TGATCACCAT TCCGCTCTTC TCGGCCCTGT CGGATCGGGT GGGGCGGCGG
GCGGTGATCG TCACCGGGGC GATCGGCATC GTCTGCTACG CATGGCCGTT CTACGCACTC
GTCGACATGG GTTCGGTTCC GCTGCTCACC GTCGCGATGG TGATCGCGCA GGTGCTGCAG
TCGCTGATGT ACGCCCCGCT GGGCGCGCTG TTCTCGGAGA TGTTCGGTAC GCGGGTGCGC
TACACCGGCG CCTCGATGGG CTACCAGTTC GCCGCCCTGT TGGGCGCCGG CTTCACACCG
TTGATCGCCA GCAGCCTGTT GGCAGAAGGG GTCTCGCGAA CTCCATTGGT GGTACTGGCC
GCGGGTTGCG GTGTGGTGAC CATCGTCGCG ATCTGGCGCG TCAGCGAGAC GCGGGGCGCC
GACCTCACCG ACGCGGGGAG GCTACCCCGC GGAGCGGCGG CGGCCGATCG CTAG
 
Protein sequence
MGFRPTGAPG NAKIGDMDET ATPDPALLRR VAISSLLGTA IEYYDFLVYG TMSALVFGII 
FFPESDPAVA TIAAFGTLAA GYVARPVGGI LFGHFGDRIG RKSMLVLTMT LMGVASFLVG
VLPTFAAIGV AAPILLVALR VIQGVAIGGE WGGATLMVTE HAEPHRRGAW NGVMQMGSPI
GSLLSVAVVT AITLMPDESF MSWGWRVPFL VSLLLLGLGI YVRLSITESP VFEQAKRADD
RPQGPPLVEV LRRPGNLVLA CAVGIGPFAL TALISTYMIS YATAIGYHRT DVMTALIFTS
TTALITIPLF SALSDRVGRR AVIVTGAIGI VCYAWPFYAL VDMGSVPLLT VAMVIAQVLQ
SLMYAPLGAL FSEMFGTRVR YTGASMGYQF AALLGAGFTP LIASSLLAEG VSRTPLVVLA
AGCGVVTIVA IWRVSETRGA DLTDAGRLPR GAAAADR