Gene Mkms_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0130 
Symbol 
ID4615536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp143671 
End bp145317 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content67% 
IMG OID639789806 
Productvirulence factor Mce family protein 
Protein accessionYP_936138 
Protein GI119866186 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.139367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACGA TCTTCAACGT GCGGAACATG AAGATGCCGA CGTTGTCACG CGCTTCGGTG 
ATCATCGGCA CGCTTGTCGT GGTGCTGGCG CTGGTGGCCG CGTTCGCGGG CTGGCAGCTG
TACAAGAGGC TGTCCACGAA CACCGTCGTG GCGTACTTCT CCGACACCCT GGCGCTGTAC
CCCGGCGACA AGGTGCAGAT CATGGGTGTG CGGGTCGGCA CGATCGACAA GATCGAACCG
GCGGGCGACA AGATGAAGGT GACCTTCAGC TACGAGTCGA AGTACAAGGT GCCCGCGAAC
GCCACCGCGT CGATCCTCAA CCCGAGCCTG GTGGCCTCGC GCACCATTCA GCTGGCCCCG
CCGTACACCG GCGGCCCGGT CATGGAGGAT GACGCGGTCA TCCCGATCGA CCGCACCCAG
GTGCCCGTCG AGTACGACGA GCTGCGTGAC TCGCTCGACC GCATCCTCAC CGACCTCGGC
CCCACGCCGG ACCAGCCCAA GGGTCCGTTC GGTGACGTGA TCGAGTCCTT CGCCGACGGT
CTGTCCGGCA AGGGAAAGCA GATCAACACG ACGTTGAACA GCCTCTCGGA GGCGCTGACC
ACCCTCAACG AGGGCCGCGG TGACTTCTTC AGCGTGGTCA AGAGCCTCGC GTTGTTCGTC
AACGCGCTCT ACCGCAGCGA TCAGCAGTTC GTCGCCCTCA ATGACGACCT GGCGCAGTTC
ACCAACTCGT TCACCAACAC CGACCGCGAG CTGGCGACCG CGCTGCAGGA CCTCAACGAG
CTGCTCACCA CCACGCGCGG GTTCCTCGAC GAGAACAGTG AGGTCCTGAC CAAGGACATC
AACAACCTCG CCGACGTGAC CAACGCGATC CTGCAGCCCG AACCGCTCGA CGGTCTGGAA
ACGGGTCTGC ACGTGTTACC GAACCTGGGC GGCAACATCC TCAACATCAG CTCACCGGTC
AACGGCGGCA TCGTCGGTGT GCCGGTCATC AACGGCATGG CCAACCCGAT GCAGTTCATC
TGCAGTTCGA TCCAGGCGGG CAGCCGGCTG GGCTACCAGG AGTCGGCGGA ACTGTGCGCG
CAGTACCTGG CGCCGATCCT CGATGCGCTG AAGTTCAACT TCCCGCCGTT CGGGTTGAAC
CAGATCAGCA CGGCCATGAC GTTGCCGAAG ATGATCGCCT ACTCCGAGGA CCGGCTGCGC
CCGCCGCCGG GATACAAGGA CACCACGGTG CCCGGCATCT TCTCCCGCGA CACGTTGTTC
TCCCACGGCA ACCACGAGCC CGGCTGGGTC GTCGCCCCGG GGATGCAGGG CGTCGACGTG
CAGCCGTTCA CCGCGAACAT GCTGACGCCG CAGTCGCTGG CCGCGCTGCT CGGCGGACCC
GACGCGCCGA TCCCGGGTGC ACCGCCCGCG TTCGGCACCA CGCGCGACGG CAACCTGCCC
GGCCCGCCGA ACGCCTTCGA CGAACGCAAT CCGTTGCCGC CGCCGTGGTA CCCGCAACCC
GGCCCGCCGC CCGCACCCGC CCCGGGTGTC ATCCCGGGCG ACCCCGGGGG CTCCCCGCTG
TCGGGTCCGG CGCCAGGACC CGCGCCCGCC GCGCAGGCAC CCGCACCGGC AGGCCCGCCG
TTGCCCGCTG AAGCAGGAGC GCCGTGA
 
Protein sequence
MSTIFNVRNM KMPTLSRASV IIGTLVVVLA LVAAFAGWQL YKRLSTNTVV AYFSDTLALY 
PGDKVQIMGV RVGTIDKIEP AGDKMKVTFS YESKYKVPAN ATASILNPSL VASRTIQLAP
PYTGGPVMED DAVIPIDRTQ VPVEYDELRD SLDRILTDLG PTPDQPKGPF GDVIESFADG
LSGKGKQINT TLNSLSEALT TLNEGRGDFF SVVKSLALFV NALYRSDQQF VALNDDLAQF
TNSFTNTDRE LATALQDLNE LLTTTRGFLD ENSEVLTKDI NNLADVTNAI LQPEPLDGLE
TGLHVLPNLG GNILNISSPV NGGIVGVPVI NGMANPMQFI CSSIQAGSRL GYQESAELCA
QYLAPILDAL KFNFPPFGLN QISTAMTLPK MIAYSEDRLR PPPGYKDTTV PGIFSRDTLF
SHGNHEPGWV VAPGMQGVDV QPFTANMLTP QSLAALLGGP DAPIPGAPPA FGTTRDGNLP
GPPNAFDERN PLPPPWYPQP GPPPAPAPGV IPGDPGGSPL SGPAPGPAPA AQAPAPAGPP
LPAEAGAP