Gene Mkms_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0124 
Symbol 
ID4615530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp136250 
End bp137920 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content69% 
IMG OID639789800 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_936132 
Protein GI119866180 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.514213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.109541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCTCCG AGCCCGACGC CTCTGAGCCT TCACACACCG AGCAGCCGTA TCTCGCCCGC 
AGGCAGAACT GGACCAATCA GCTCGCCCGG CACGCCCTCA TGCAGCCGGG CGACACCGCA
CTGCGTTTCA TGGGCCGCAC CACCACCTGG GGTGAACTCG ACGACCGCGT CACCAAGCTG
GCCGGAGCCC TGAGCCGCCG CGGCGTCGGT TTCGGCGACC GTGTCCTCAT CCTCATGCTC
AACCGCACCG AGTTCATCGA GTCGTTCCTG GCCGTCAACA AGCTCGGCGC CATCGCCGTC
CCCGTCAACT TCCGCATGAC CCCGCCGGAG ATCGCCTTCC TCGTCAGCGA CTGCGCCGCC
CGCGTGGTCG TCACCGAAGC GGTGCTGGCC CCCGTCGCCA CCGCGGTACG CGACCTCGAT
CCGACGCTCG AGACGGTGAT CGTCGCCGGT GGCGCCACCG ACGACGGGAT CCTGGGCTAC
GACGACCTGA TCGCCGAACC CGGTGAGGCG CCGGCGCCCG TCGACATCCC CAACGACGCA
CCCGCGCTGA TCATGTACAC CTCGGGGACC ACCGGCCGCC CGAAGGGTGC GGTGCTCACC
CACGTCAACA TCGCCGGCCA GGCGATGACG TTCCTGTTCA CCAACGGCGT CGACCTCAAC
CACGACGTCG GTTTCATCGG GGTGCCGCTG TTCCACATCG CCGGTATCGG CAACACGATC
GTCGGCCTGC TGCTCGGCCG CCCGACCGTC CTCTACCCGC TCGGCGCGTT CGACCCGGGG
GCGCTGCTCG ACGTGCTCGC CGAAGAAAAG GTCACCGGCA TCTTCCTGGT GCCCGCGCAG
TGGCAGGCGG TGTGCGCAGC GCAGCGGGCC AAACCGCGCG ACCTCAAACT GCGGGTGCTG
TCCTGGGGCG CCGCGCCCGC TTCGGACACC CTGCTGCGCG ATATGGCGGA GACCTTCCCC
GGCGCGCAGA TCCTCGCCGC CTTCGGCCAG ACCGAGATGT CGCCGGTCAC CTGCATGCTG
TTGGGCGAGG ACGCGCTGCG AAAGCTCGGC TCGGTGGGCA AGGTCATCCC GACGGTGGCC
GCGCGCATCG TCGACGAGGA CATGAACGAC GTCCCGATCG GACAGGTCGG GGAGATCGTC
TACCGGGCCC CGACGCTGAT GGCCGGCTAC TGGAACAACC CCAAGGCCAC CGCCGAAGCA
TTCGAGGGCG GCTGGTTCCA CTCCGGCGAC CTGGTCCGCC AGGACGAGGA GGGCTACATC
TGGGTCGTCG ACCGCAAGAA GGACATGATC ATCTCGGGTG GCGAGAACAT CTACTGCGCC
GAGGTCGAGA ACGTGCTCGC CGCCCACCCC GCGATCGCCG AGGTGGCGGT CATCGGGCGC
GCCCACGAGA AGTGGGGTGA GGTGCCGGTG GCCGTCGCGG CGGTGCGTGG CGCCGAGGAC
GCTGCCAAGC CGCCGGCGCT GTCATTGGCG GATCTCGACG AATTCCTGAC CGAACGGCTG
GCCCGGTACA AGCACCCGAA GGCGCTCGAG ATCGTCGACG CGCTGCCCCG CAACCCCGCC
GGCAAGGTCC TCAAGACGGA GCTACGCCAG CGGTACGCAG GCCCGAAGCC GATTGACGTT
GGCGAAAGTT CCACTGCGCC AACGGGTTCG GCAGCAGGTC CGGGAAGCTA G
 
Protein sequence
MTSEPDASEP SHTEQPYLAR RQNWTNQLAR HALMQPGDTA LRFMGRTTTW GELDDRVTKL 
AGALSRRGVG FGDRVLILML NRTEFIESFL AVNKLGAIAV PVNFRMTPPE IAFLVSDCAA
RVVVTEAVLA PVATAVRDLD PTLETVIVAG GATDDGILGY DDLIAEPGEA PAPVDIPNDA
PALIMYTSGT TGRPKGAVLT HVNIAGQAMT FLFTNGVDLN HDVGFIGVPL FHIAGIGNTI
VGLLLGRPTV LYPLGAFDPG ALLDVLAEEK VTGIFLVPAQ WQAVCAAQRA KPRDLKLRVL
SWGAAPASDT LLRDMAETFP GAQILAAFGQ TEMSPVTCML LGEDALRKLG SVGKVIPTVA
ARIVDEDMND VPIGQVGEIV YRAPTLMAGY WNNPKATAEA FEGGWFHSGD LVRQDEEGYI
WVVDRKKDMI ISGGENIYCA EVENVLAAHP AIAEVAVIGR AHEKWGEVPV AVAAVRGAED
AAKPPALSLA DLDEFLTERL ARYKHPKALE IVDALPRNPA GKVLKTELRQ RYAGPKPIDV
GESSTAPTGS AAGPGS