| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_0043 |
|---|
| Symbol | |
|---|
| ID | 4615610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 51544 |
|---|
| End bp | 52149 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639789720 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_936052 |
|---|
| Protein GI | 119866100 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00545933 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGTC GACCCGAGCG CGCAGGCGTG ACCAACGCCA GCATCAACAC GGGGCGCCGC
CAACGCCTTG ACGCTCAACG CAACGTCCTC TCGATCCTGG AGGCAGCGAA GACAACCTTT
GCGGACAGCG GTGTCGATGT TCCCGCTAGA ACCATCACCG ACCTGGCCGG TGTGGGCGTG
GGGACGCTTT ACCGCCACTT CCCACGCAGA TCCGATCTCA TCCTCGCTGT CATCGAGCGC
GAGATCGATG ACTGCATCGA GGCAGCGCAT GAGTTGACCG CACGCATGGA ACCCCGCGAT
GCGTTGGTGG CCTGGGTCAG CCGATTCGCG GAGTTTGTGC GCACCAAACA CGGCCTCGCG
AACGCGCTGC ATTCCGGAGA TCCTGCCTAC ACCGGCCTGG CCGACACTCT GCTGGACCGT
CTTGAGCCGG TCCTGGATTC GCTACTCGAA CGGGTACCTC TGAACGTTCG AAACCGCGAC
ACCGTGTCGG CACGCGACGT GCTGACCACG ATTGCGCTCA TGTGCCAACC GGTGCCCGGC
GAAACGTCGT CCTTCAACGA ACGCATGACG AAGATCTTCC TTGAGGGTTT GCTGGCCTCC
GGGTGA
|
|---|
| Protein sequence | MAGRPERAGV TNASINTGRR QRLDAQRNVL SILEAAKTTF ADSGVDVPAR TITDLAGVGV
GTLYRHFPRR SDLILAVIER EIDDCIEAAH ELTARMEPRD ALVAWVSRFA EFVRTKHGLA
NALHSGDPAY TGLADTLLDR LEPVLDSLLE RVPLNVRNRD TVSARDVLTT IALMCQPVPG
ETSSFNERMT KIFLEGLLAS G
|
|---|
| |