Gene Mkms_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0034 
Symbol 
ID4615601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp41810 
End bp42478 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content61% 
IMG OID639789711 
Producturacil-DNA glycosylase superfamily protein 
Protein accessionYP_936043 
Protein GI119866091 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0370296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATCC GCAGGGATCC TGAGGGTTCG CTTCAGCATC GGAAGAACCT GCTCGACGAC 
GAGATCCGCA GTTGTTCGCG CTGTGCGGGT ATGAACGAGG AGGGCGTGAC CCAGGCTGCG
CCAGGCTGGG GCAATCTGTA TTCACCGGTC GTGATTGTGG GGCAAAGCCT CTGTGAGCAG
TGCATGAAGC CGCAGGAGCC CTTCTTCGAA GGAAGTGGAA GCTTGCTCAA CGAAGGTCTG
CGGCTGGCCG GCCGTGCGAA GGGAGAGACA TTCATCAGCA ATGTGGTGCA TTGTCACCCA
CCTAAGAACC GTGGGTCGCG TGAGCACGAG ATAGTGAACT GCTCGTCATA TCTGCATCGC
GAGCTCGAGC TGGTGCGTCC GCGATTGGTC ATCGCGCTCG GTGTCGACGC CAAACGTGTT
CTGTCATTCT TCTACCCCTC GGCGCGGGTC TCTCCGTGGC CATTTCGTGC GTCGAGCGGT
CGGCAGCCGC GCTCGCCTTA CTTGCTTTTC GCCAAGCACC CCGCCTGGAT CAAGCGCCAG
CACGACAGCG CACTCGAACA GGAGTACGTC CATAGTTTGG CCGACGCCAT GCGGTGGGTC
TTTCACGATG CTGCCCCCGG TCTTGAGCCC ACGTGCGCTG GAATGGCTGA CGTCAACGCA
ACGGACTGA
 
Protein sequence
MTIRRDPEGS LQHRKNLLDD EIRSCSRCAG MNEEGVTQAA PGWGNLYSPV VIVGQSLCEQ 
CMKPQEPFFE GSGSLLNEGL RLAGRAKGET FISNVVHCHP PKNRGSREHE IVNCSSYLHR
ELELVRPRLV IALGVDAKRV LSFFYPSARV SPWPFRASSG RQPRSPYLLF AKHPAWIKRQ
HDSALEQEYV HSLADAMRWV FHDAAPGLEP TCAGMADVNA TD