Gene Mkms_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0004 
Symbol 
ID4615568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2860 
End bp3405 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID639789678 
Productsingle-stranded nucleic acid binding R3H domain-containing protein 
Protein accessionYP_936013 
Protein GI119866061 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.417011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.115492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CTGATACGAC CGAGCGGACC GAGGACGTCG AGACGCGGGA TGCCGAGGAG 
ATCACGGCCC CGGAGGACGA CCTCGAGGAC CGGTTGGTGG CCGAAGGCGA GATCGCCGGC
GACTACCTGG AGGAGTTGCT CGACCTGTTG GACTTCGACG GTGACATCGA TCTGGATGTC
GAGGGCGACC GGGCGGTCGT GAGCATCGAC GGCGGGACCG ACCTGAACAA GTTGGTGGGC
CGCAAGGGTG AGGTGCTCGA CGCGCTGCAG GAGCTGACGC GGTTGGCGGT CCACCAGAAG
ACCGGCGAGC GTAGCCGGCT CATGCTCGAC ATCGCCCGCT GGCGCCGGCG CCGTCGCGAC
GAGCTGGCCG CGCTGGGGGA CAAGGTCGCG CGCCGCGTCC TCGAAACCGG TGAGCGCGAA
GAGCTCGCCC CGATGACGCC GTTCGAACGC AAGATCGTGC ACGACGCCGT TGCGGCGGTC
GCCGGTGTGC ACAGCGAGAG CGAGGGCGTC GAGCCGTCGC GCCGCGTGGT CGTGCTCGCC
GACTGA
 
Protein sequence
MTDADTTERT EDVETRDAEE ITAPEDDLED RLVAEGEIAG DYLEELLDLL DFDGDIDLDV 
EGDRAVVSID GGTDLNKLVG RKGEVLDALQ ELTRLAVHQK TGERSRLMLD IARWRRRRRD
ELAALGDKVA RRVLETGERE ELAPMTPFER KIVHDAVAAV AGVHSESEGV EPSRRVVVLA
D