Gene Mkms_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0003 
SymbolgidB 
ID4615567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2122 
End bp2799 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content71% 
IMG OID639789677 
Product16S rRNA methyltransferase GidB 
Protein accessionYP_936012 
Protein GI119866060 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 
TIGRFAM ID[TIGR00138] 16S rRNA methyltransferase GidB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0894552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.113174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACACG TCGCGCCACC GCCCACCGCC GAGGCGGTCT TCGGTGACCG GCTCCCGCTG 
GCGCAGCGCT ACGCCGAGTT CCTCGCCACC GCCGGCGTCG AGCGTGGGCT GATCGGCCCA
CGCGAGACGG ACCGGATCTG GGATCGGCAC ATCCTCAACA GTGCTGCGCT CGGCGAGTCG
GTGGAGTCGG GGGACCGGAT CGCCGACATC GGGAGCGGTG CCGGGCTGCC CGGGATACCG
TTGGCGCTGG CGCGGCCCGA CGTCCACGTG ACGCTGATCG AACCGATGCA GCGACGGTGC
GAGTTCCTCA CCGAGGTGGT CGACGCGCTC GGCGTCGCAG TGATCGTCGT GCGGGGTCGA
GCGGAGAATC CGGCGGTGCG TCGTGAGGTG GGGGAGATGG ACGTGGTGAC ATCGCGCGCG
GTCGGCTCGC TCGACAAACT CGCGACCTGG AGCATGGGGA TTCTTCGCGA GGGCGGTCGG
ATGTTGGCGC TGAAGGGCGC CCGCGCCGAG GCGGAGATCG AGGAGAACCG GCGTGTGCTG
GCGCGGGCCG GCGCGGTCGA TGTCAGGGTA TTGAGGTGTG GCGCGGACTA TTTGAACCCG
CCCGCCACCG TGGTCGAGGC GCGGCGCGCG ACGCCGTCGA ACGGCCGCGG GCGGCCGGGG
CGATCGAGCA GGAGATGA
 
Protein sequence
MKHVAPPPTA EAVFGDRLPL AQRYAEFLAT AGVERGLIGP RETDRIWDRH ILNSAALGES 
VESGDRIADI GSGAGLPGIP LALARPDVHV TLIEPMQRRC EFLTEVVDAL GVAVIVVRGR
AENPAVRREV GEMDVVTSRA VGSLDKLATW SMGILREGGR MLALKGARAE AEIEENRRVL
ARAGAVDVRV LRCGADYLNP PATVVEARRA TPSNGRGRPG RSSRR