Gene Mkms_5981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5981 
Symbol 
ID4610689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008704 
Strand
Start bp183571 
End bp185736 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content66% 
IMG OID639789635 
Productphage integrase family protein 
Protein accessionYP_935970 
Protein GI119855367 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.259227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGTG TTCGCAACGA ATTCCGAAGC GACGTACTGG AGTTCGATGC TGAGGATCCG 
GTGTTCGGTG GCGGATCGTG TCTCGTGGAT GGCTGCGAGC GAAGCGCCCG CGGCCGCGGT
TTGTGTCCGG GCCATCACCA GCGGTGGTCC AACGCCGGCC GCCCTGCCCT GGACGAGTTC
GCCGCCTCGA CAGATCACCG GTGGCGCAAA CAGCGGCCCA ACCAGTGCTG CCGGGCCCGT
GCCTGCGGCT ACGGCTCCGC CCGTGGAGGG CTATGTCAGC TGCACGCTCA ACGGTGGGAA
CGAGCCGGAC GTCCCGACCT CGATCAGTGG TGCGAGGACC CGCCGCCGAT CAAGAAGCCA
GTTCCGGATG CACGCTGCCG AATCGAGCAC TGCTCGTTGT GGCCTCAAGC CCAACTGGCG
TTCTGCCACA CCCACGCCAA TACCTGGAAG GCCAACGGCC GCCCCGACAT CGAGGAGTTC
GCATCCCGGT TCGCCTCGAC CGAGATACCA CCCAACGAGA CAATCGTGCT GGGTAGCTTG
ACACCGCAGC TGAAGTTGGA GATGCAGTAT GTGCTGCAGT TTCGCCACGA CGAGCGTCGG
GGCAAACTCA CCCCGACGAT CGTCGCGCGA GTGGTGCGAC TGCTGGCTCA GGCCGGGGTC
GCGTCCCTGC TCGAGCACGA CGAAGACGCC TGGCGCGAAC ACTCCGCATC GCTGCGAACC
GACACCCGCT CGCGGGGACT ACTCATCTAC GCCTACCGCA CGGTCGTGGA CCTGGCCGAA
GCCGGTGGCT GGGAGGCCGA ATATCGCCGC GACGTCTGGA GAATGCACCG CCTCGGCTTC
GAAGGTCGAT ACACCCTGCA GTTCAACCGC ATCCCGCAAC CTTGGCTGCG GGAACCTGCC
AAACGCTGGA TCCGACTGCG CCTCTCACGC GGCCTTGGCC TGGAAGCCGG CGGCGGGCGC
CCGGTGCTGG CCATCGCCAG ATTCGCCCAA TTCCTCGCCG CAGCCGGTAT CGATCGAATC
GAGCTAATCG ATCGCGCGCT GCTGGAACGC TACCTCGCCG ACCTGCACCG GGAATTGCGC
CCGCAGCACC AAGGCAGCCA CACCGGGCTG CTCAACGGGT TCTTCGCCGC CATCCGCCAA
CACCGTTGGA GCCCTGACCT TCCCGCGACA GCGATGTTCT TCACCGAGGA CTATCCCCAG
CGCGGCGAAC ACCTACCCAA GGCGTTGGCT GAACACGTCA TGACTCAGCT TGAACATCCC
GACAACCTCG ACCGCTGGGA TAACCCCACC TACCGGTTGA TCACCATCAT CCTGATGCGC
TGCGGACTGC GGATCACCGA CGCCCTGCGG CTGCGCGGTG ACTGCATCAC CACCGACGCC
GACGGCGCGC CCTACCTGCG CTACTTCAAC CACAAGATGA AACGCGACGC CCTGGTGCCC
ATCGACCCCG ATCTCGCCGA CCTCATCGGC GCTCAGCGTG ACCGCACCAG CCAACGCTGG
CCAGACGGCA CCCCGCTGCT GTTCCCGCGC CCCACCAAGA ACCTCAACGG TCAACTCCCA
CTGGCAATCC CGACCTACCG GGAAGCGCTA GGCCGCTGGC TGCACGCATG CGACATATGC
GACGAACACG GCCACCAAGT GCGAGTCACT CCGCACCAAT GGCGACACAC CCTGGGCACC
CGCCTGATCA ACCGCGACGT TCCCCAAGAG GTCGTGCGCC GAATCCTTGA CCACGACTCA
CCGCAGATGA CCGCGCACTA CGCCCGCCTG CACGACACCA CCGTGCGTCG CGCCTGGGAA
GCCGCACGCA AAGTCGACAT CCACGGCCAC ACCGTCGCCC TTGACCCCGA CGGGCCACTC
GCCGAAGCCG CCTGGGCCAA ACAACGCCTC GGCCGCGCCA CCCAGGCCCT GCCCAACGGC
TACTGCGGCC TGCCCGTCCA ACAGAGCTGC CCCCACGCCA ACGCCTGCCT GACCTGCCCT
ATGTTCCTGA CCACCCCCGA ATTCTTGCCG CACCATCGAG CTCAACGCCA CCAGACCCTC
GAGCTGATCA CCACCGCCGA AGCCCGCGGC CAGAACCGCC TCGCCGAAAT GAACCGACAG
GTGCTCGGAA ACCTCGACAC CATCATCGCC TCCCTCGACA CCGAAGCTCC CGCACATGAA
GGCTGA
 
Protein sequence
MAGVRNEFRS DVLEFDAEDP VFGGGSCLVD GCERSARGRG LCPGHHQRWS NAGRPALDEF 
AASTDHRWRK QRPNQCCRAR ACGYGSARGG LCQLHAQRWE RAGRPDLDQW CEDPPPIKKP
VPDARCRIEH CSLWPQAQLA FCHTHANTWK ANGRPDIEEF ASRFASTEIP PNETIVLGSL
TPQLKLEMQY VLQFRHDERR GKLTPTIVAR VVRLLAQAGV ASLLEHDEDA WREHSASLRT
DTRSRGLLIY AYRTVVDLAE AGGWEAEYRR DVWRMHRLGF EGRYTLQFNR IPQPWLREPA
KRWIRLRLSR GLGLEAGGGR PVLAIARFAQ FLAAAGIDRI ELIDRALLER YLADLHRELR
PQHQGSHTGL LNGFFAAIRQ HRWSPDLPAT AMFFTEDYPQ RGEHLPKALA EHVMTQLEHP
DNLDRWDNPT YRLITIILMR CGLRITDALR LRGDCITTDA DGAPYLRYFN HKMKRDALVP
IDPDLADLIG AQRDRTSQRW PDGTPLLFPR PTKNLNGQLP LAIPTYREAL GRWLHACDIC
DEHGHQVRVT PHQWRHTLGT RLINRDVPQE VVRRILDHDS PQMTAHYARL HDTTVRRAWE
AARKVDIHGH TVALDPDGPL AEAAWAKQRL GRATQALPNG YCGLPVQQSC PHANACLTCP
MFLTTPEFLP HHRAQRHQTL ELITTAEARG QNRLAEMNRQ VLGNLDTIIA SLDTEAPAHE
G