Gene Mkms_5557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5557 
Symbol 
ID4610246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008703 
Strand
Start bp66747 
End bp67733 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content67% 
IMG OID639789221 
ProductDNA ligase (ATP) 
Protein accessionYP_935556 
Protein GI119854951 
COG category[L] Replication, recombination and repair 
COG ID[COG1793] ATP-dependent DNA ligase 
TIGRFAM ID[TIGR02779] DNA polymerase LigD, ligase domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.756283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.365478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGCG CATCGTTGTC CCCCGACCGC CTCGTGGCCC CTGCGCCCAT GTTGGCGACG 
CTGGGACCGG CCCCGCGCGG CGGTCAGTTT GCTGTAGAGG TGAAGTTTGA TGGCCAGCGG
GGAATATTGA CTGTTGATCG CCGCGTGCAG GTGACGTCTC GCAATGGGGC GGACATCACT
GAAACTTTCC CCGAGTTGTC CGCCGTCGCG GCTGCGGTCG GCGGCCGTCG GATGGTCCTT
GACGGTGAGA TCGTCGCCGT CGACGAGCAC GGCCGCCCGT CGTTTAGACG GCTTCAGCGG
CGGTGGCCTC AGCAGCGGCG GCCCGGCGCG CAGCTCGTGC GTGAGGTTCC CACGCGTTTT
CTAGCCTTCG ATGTGATGAA CATCGAGGGC GAAGACATCA CGCACTGGCC TTACCGGGAG
CGCCGCGAGC TGTTGGACAC GCTGATGGTG ATGGAGAGTT CGCCAGCACT GACGGTGCCT
AGGCATTGGA CCGATGTCGC GCCTGCCGAC ATGCTCGCTA TATGCGCTGA TCAGCACCAC
GAGGGCATCG TGTGTAAACG GCTGGATTCG CCATACCGGT CGGGCCGGTC CCGGGACTGG
ATTAAGTGCC CAGTGCGCGC GACAACCGAG GCGGTGATCG TGGGGGCGTT CGCCGGCCAT
CGCGGCGAGG TTGGGACCCT GGTCTTGGCC GCCCACGACG AGGCGGGACA ACTCGTGCTG
TTGGGTCAGG TGGGCACGGG TTTTAGTGGT GCCGAGCGTC GCCGTCTGGC CACACTGTTG
GCCGGGACTG AGGTCTCCGC GCCGCCGGTT GCGGTGGGGG CGTCGATGTC GGGGGTCCAG
TGGTTCAAGC CGCGGTATGT CGGTGAGGTT GCCTACCGCG AGTATCACGC GGGCAAAGGT
CTGCGCCATG CGTCGTGGAA GGGGCTGCGT TCCGAGCCCG CGTCGGGGGT GTGTTTGCCG
CGCGATGCCG GCGCGGCGCC CGGCTAA
 
Protein sequence
MTRASLSPDR LVAPAPMLAT LGPAPRGGQF AVEVKFDGQR GILTVDRRVQ VTSRNGADIT 
ETFPELSAVA AAVGGRRMVL DGEIVAVDEH GRPSFRRLQR RWPQQRRPGA QLVREVPTRF
LAFDVMNIEG EDITHWPYRE RRELLDTLMV MESSPALTVP RHWTDVAPAD MLAICADQHH
EGIVCKRLDS PYRSGRSRDW IKCPVRATTE AVIVGAFAGH RGEVGTLVLA AHDEAGQLVL
LGQVGTGFSG AERRRLATLL AGTEVSAPPV AVGASMSGVQ WFKPRYVGEV AYREYHAGKG
LRHASWKGLR SEPASGVCLP RDAGAAPG