Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1968 |
Symbol | |
ID | 4617405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1785579 |
End bp | 1785908 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639785059 |
Product | GTP cyclohydrolase I |
Protein accession | YP_931458 |
Protein GI | 119873451 |
COG category | [R] General function prediction only |
COG ID | [COG0780] Enzyme related to GTP cyclohydrolase I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000145372 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000000000137829 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCAAGC TTTCTAAAAA CCCCTCTCTA GTCCGTTTAA AAACACGTGG CGAGTCTATA TGCCCCATTA GCAAAGTGGT AGACTCCTTT GAGATATCTC TAGAGTATAT CCCAAGAGGC GTCGCGTTGT CTATAGAGGA GTTTAAAAAA ATGGTAGATA GCTATAGAGG CAGAGAAATA CTTCACGAAG AACTCGCCGT AGATATAATG GAGAGAGTAA AAGCGGCTGT CAACCCGCCG TATGTCAAAG TAGTTGTAAA GTCTATATAT ATGGGCGTTG AGGTTGAAGT TATAGCCGAG TCTGGGGGCG TCCCGCCGGT GTATATCTAA
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Protein sequence | MLKLSKNPSL VRLKTRGESI CPISKVVDSF EISLEYIPRG VALSIEEFKK MVDSYRGREI LHEELAVDIM ERVKAAVNPP YVKVVVKSIY MGVEVEVIAE SGGVPPVYI
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