Gene Pisl_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1968 
Symbol 
ID4617405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1785579 
End bp1785908 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content44% 
IMG OID639785059 
ProductGTP cyclohydrolase I 
Protein accessionYP_931458 
Protein GI119873451 
COG category[R] General function prediction only 
COG ID[COG0780] Enzyme related to GTP cyclohydrolase I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000145372 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000000000137829 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCAAGC TTTCTAAAAA CCCCTCTCTA GTCCGTTTAA AAACACGTGG CGAGTCTATA 
TGCCCCATTA GCAAAGTGGT AGACTCCTTT GAGATATCTC TAGAGTATAT CCCAAGAGGC
GTCGCGTTGT CTATAGAGGA GTTTAAAAAA ATGGTAGATA GCTATAGAGG CAGAGAAATA
CTTCACGAAG AACTCGCCGT AGATATAATG GAGAGAGTAA AAGCGGCTGT CAACCCGCCG
TATGTCAAAG TAGTTGTAAA GTCTATATAT ATGGGCGTTG AGGTTGAAGT TATAGCCGAG
TCTGGGGGCG TCCCGCCGGT GTATATCTAA
 
Protein sequence
MLKLSKNPSL VRLKTRGESI CPISKVVDSF EISLEYIPRG VALSIEEFKK MVDSYRGREI 
LHEELAVDIM ERVKAAVNPP YVKVVVKSIY MGVEVEVIAE SGGVPPVYI