Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1961 |
Symbol | |
ID | 4617192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1777287 |
End bp | 1777865 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639785052 |
Product | hypothetical protein |
Protein accession | YP_931451 |
Protein GI | 119873444 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000657017 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000000000000306549 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCATGA GAAAAGACCG TGTTAACATA GCTGTTGCTA AAGAAATCGC AGAAGAGCTG GCTAAGGTAG CTGAAGAACT CGGCATGACG CAATATGCGT TGGCGAATCA AATCCTCGGC GTAGGGCTTG AACTTCTACG CCAAGGCTAC AGCCTGGCTC AAATTAAAGA AATTACACTA TTTTACAAAG TTATGATAGA ACTCGAAAGC GTGCCTGTGC CCGGCAGACT ACTCGATAGA ATGATTACAG ATATGGCTAA AGAAAACCCA GAGGTCGTAC ACCGCGCCTG GTGTGACGCA GGGAGGATGC TCGCAGCATA TATAAAGGCG GTGTTTGGAG ACCTAGAGAA AGCAGTAGAG CTGTCGCCAC ATTTAGCTAG AGTTGTGCCA GCCAGACGTT TTGAAATCAA GGCCAAAGGG GGAGAGTTCT CCATGGATAC AGTAGGGGTT GGCTATAGTA TAGAAAGTGT ACAAGCCACC GCCAGGGCAG TCCAGTGTCT ACTAGAGGAA CTCGGCTACG AGCTGAAAGA AGTTGTAACG GCGCCAGGAA TCCTCCGCGT CAAAGCGCTG AAAAAGTAA
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Protein sequence | MSMRKDRVNI AVAKEIAEEL AKVAEELGMT QYALANQILG VGLELLRQGY SLAQIKEITL FYKVMIELES VPVPGRLLDR MITDMAKENP EVVHRAWCDA GRMLAAYIKA VFGDLEKAVE LSPHLARVVP ARRFEIKAKG GEFSMDTVGV GYSIESVQAT ARAVQCLLEE LGYELKEVVT APGILRVKAL KK
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