| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1958 |
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| Symbol | |
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| ID | 4616339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 1773830 |
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| End bp | 1774846 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639785049 |
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| Product | ABC transporter periplasmic-binding protein |
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| Protein accession | YP_931448 |
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| Protein GI | 119873441 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0213047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 1.86869e-16 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCATTA GGACTTTATT GGCAGTTGTA ATAATAATAG CCGCCCTCTT GGCGGCGCTC
TTGGCTTGGC AAGCGTTTCA ACAACAGTCG GCGAAGAGAC TTGTGATAGT GGGCCCCGCC
GGCATCAGCG ATTTGGGCAA GGAGTTGGCT AAGAAGTTCA GCGAGAAATA TGGCGTAAAC
GCCACCTTTG TCCCCCTAGG CGGCGCTGTG GAGATGGTAA ACGAGTTGGT TAGAAACAGA
GACAACCCGC CCTGGGACGT GACCATTGGG GTGCCTGAGT TCTACTACAT GGTGCTTATC
GAAAGGGGCG TGCTCTATTG TCCGGGCTTC AAGGTGGAGG GGGTGCCGGC CGAGGAGTAC
TGGGATCCCC ACGGCTGCGT CTACCCGCTT GATAAGTCGT ACATAGGGAT TGTCTACAAC
GAGACAGCTC TCGCCGCGCG GGGCCTCAAG CCGCCTCAGA CCCTCGACGA TCTTCTGAAG
CCTGAGTACA AGGGGCTTAT CACATATCCC AACCCGGTTC AGTCCGGCAC CGGCCTCGCC
GTGCTCTCGT GGGTGATGTC TGTGAAGGGG GAGGAGGAGG GCTGGCGCTA CCTCAAACAG
CTGGCCGGCC AGATCTCTAA GATCGGCTAT CCTTCAGGAT TTACGCCATT GAGAAACGCA
TTGAAGAGGG GTGACGTATT GATCGCCCTC TCGTGGTACA GTCACGCCAT CGACCCAGGC
ACGCCGAATA TAAAGGCCGC GACGTACAGC GCCTTCTTGT ATAGGGAGGG GGTGGCTGTG
TTGAAAAACG CCAGGAATAG GGATCTGGCT GTGGAGTTCG TCAAGTTCGC ACTGAGTAAA
GAGGGGCAAG ATCTTGTCGA CCCATACAAC TACATGCTCC CGGTTAGGCC AGACGCCGTT
ATTAAAAACA ACAAGGGCCT CCCGCAGCCC CAGTCTGTGG TGGTGTACAA CTCTGCCCTG
GGCGCAAAGG CCGACGAGTG GAGGCTGAGG TGGCAGAGAG AAATCGCCTC TGGGTGA
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| Protein sequence | MSIRTLLAVV IIIAALLAAL LAWQAFQQQS AKRLVIVGPA GISDLGKELA KKFSEKYGVN
ATFVPLGGAV EMVNELVRNR DNPPWDVTIG VPEFYYMVLI ERGVLYCPGF KVEGVPAEEY
WDPHGCVYPL DKSYIGIVYN ETALAARGLK PPQTLDDLLK PEYKGLITYP NPVQSGTGLA
VLSWVMSVKG EEEGWRYLKQ LAGQISKIGY PSGFTPLRNA LKRGDVLIAL SWYSHAIDPG
TPNIKAATYS AFLYREGVAV LKNARNRDLA VEFVKFALSK EGQDLVDPYN YMLPVRPDAV
IKNNKGLPQP QSVVVYNSAL GAKADEWRLR WQREIASG
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