Gene Pisl_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1953 
Symbol 
ID4617133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1767322 
End bp1768473 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content60% 
IMG OID639785044 
Productpeptidase M16 domain-containing protein 
Protein accessionYP_931443 
Protein GI119873436 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000284183 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.567889999999999e-20 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTTGTTGG ATAATGGGGT GAGGCTGGTG TTGGATAAGT TTGCCGCGCC TACGGCGGCT 
GTGGTGGTGG GGATTGGGGT GGGGTCGCTG TTTGAGGGGA GGGAGAGGAG GGGCATAACC
CACCTGCTGG AGCACATGTT GTTCCGGGTG CCTGGGTTCG ACGTAGATGA GGCTGTGGAG
TCGCTAGGCG GGTCTAACAA CGCCTATACA GAGCGAGACG TCCTCCTCTT GGTTTTCGAG
GGGGTCTCCG AGTCGGCTGT TGGGTTGGTG GAGCTGGCCT TCCGGCTGTA TGCCAACGAG
CGGTTTGAAG AGGCCGACTT GGAGCGGGAG AAGGACGTAG TGCTTTCTGA ACTTAGACAG
ATTCGGGAGG ACCCCTCCGA CTGGGTTGGG GAGCTGGGGA TAAAGGCGCT TTTTGGCGAT
TCGGACTGGG GGGATCCGGT GGGGGGCACG CCGGAGGCTG TGGAGTCCAT CTCGCTGGGG
AACCTCCTGG AGTTTAAGAG GAGGTGGTTC ACGCCAGGGA ACACTTTCGT AGTTCTGTCA
GGTGGGTTTG GGGAGGAGGC TGTCGCCAAG GCGGTTGAGC TTTTTGGGAG ACTTGAGGGG
GAGGCTCCGC CTAGGCCGAG GCCTACGGCG GGGTCTGGCC CCAGGAGGAT AGTGGAGAAC
CGGGAGGTAA ACGGGGTGTA TTACGCCAGG GCTGTGAGAG TGGCTGTTGG AGACCCTGCA
GAGGCCCTTG CCATGCTCCA CGGGGCGGCC TTCCATCTGG AGTCTGGGAC GAAGTCTGTC
CTTTTTAGCC TCTTGAGGAC GCTGGGCATC GCCTACTCCT ATTACGTAGA TTACGACGTG
GTGGGGGACG TGGCCTATTT GGAAGTGGTG GTGGAGTCGG CGAGGTCTCT AGAGGAGGCG
AGGAGGGCCG TGTCGGAGGC TTTGAAGCCG AGGTCGCCGC CTCCCTACAG GCTTAGGTAC
TTCGACTACG TCTGGAGGGT TGCGTGGAGG AGCCCTGCGG ATAGGGCCGT GTCTATCGCC
GAGTATGTGG CGAAGGGTGG GAGGCCGGAG GAGGCCGAGG CGGCTTTTAA GAGGGCGGCT
GAAAGAGGCA CTCTCTGGAT TACGCCTCTG GAGGAGGCCG AGGCTGTTAT AACACCAGAA
AAACTTATAT AA
 
Protein sequence
MLLDNGVRLV LDKFAAPTAA VVVGIGVGSL FEGRERRGIT HLLEHMLFRV PGFDVDEAVE 
SLGGSNNAYT ERDVLLLVFE GVSESAVGLV ELAFRLYANE RFEEADLERE KDVVLSELRQ
IREDPSDWVG ELGIKALFGD SDWGDPVGGT PEAVESISLG NLLEFKRRWF TPGNTFVVLS
GGFGEEAVAK AVELFGRLEG EAPPRPRPTA GSGPRRIVEN REVNGVYYAR AVRVAVGDPA
EALAMLHGAA FHLESGTKSV LFSLLRTLGI AYSYYVDYDV VGDVAYLEVV VESARSLEEA
RRAVSEALKP RSPPPYRLRY FDYVWRVAWR SPADRAVSIA EYVAKGGRPE EAEAAFKRAA
ERGTLWITPL EEAEAVITPE KLI