Gene Pisl_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1952 
Symbol 
ID4616792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1766635 
End bp1767198 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content51% 
IMG OID639785043 
Producthypothetical protein 
Protein accessionYP_931442 
Protein GI119873435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000533143 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.2409e-20 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTTGCTTG AGGTTGGAGA GGATGGCGTA TATGCCTATA GGGTTGGGGG TGACGTGTTG 
AGGGGGCGTG TGGTGGCTGT GGCGACGGCT GACGACATTA TAAAGGCGTC GAATTTGGGC
TATACTTTTG TTGCGGCTAA AGTGTTTCTA CCTGAGGCGG TTGAGGAGGC TGGGAAGAGG
GGGATTAGGC TAGTGAGCAT CGAAGAGATA GCCGAGCCGC TTTCTGTCTT GTTGGTCAAT
CTGTTGGCCA ACAGGAGGGG CGACATGTTG ATAAGGCTTT TCGACCAGTT GATACCGAGC
TTTATGACCA GGACTTACTA CTACTATGAG TATATGGACT ACAATCGGGG CGACGTCTAT
GCGACGTCTT TTAAGGCCAC GGTCAAGGTG CACGAGAGGT TCTACAGCGA GGTGTTTGGA
GATCTCGTCG AGTTGTTAAG TGAGCTGTCT ATGAGAATGG GCAAGACGAG GGGAGTGCAA
GTGGAGTTTG CCACAAGGAG AGAGGCGAAT AGCCACGTGG TTTCTCTAGA ATTTACAGTA
GAGAGACCTT CCAAGACGCA ATAA
 
Protein sequence
MLLEVGEDGV YAYRVGGDVL RGRVVAVATA DDIIKASNLG YTFVAAKVFL PEAVEEAGKR 
GIRLVSIEEI AEPLSVLLVN LLANRRGDML IRLFDQLIPS FMTRTYYYYE YMDYNRGDVY
ATSFKATVKV HERFYSEVFG DLVELLSELS MRMGKTRGVQ VEFATRREAN SHVVSLEFTV
ERPSKTQ