Gene Pisl_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1856 
Symbol 
ID4618051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1681971 
End bp1682801 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content51% 
IMG OID639784942 
ProductExsB family protein 
Protein accessionYP_931347 
Protein GI119873340 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTC TGGTGAAACC AGAAAGGCCT TGCCGCGCTG TCGCCGTCGT ATCCGGGGGG 
CCTGACAGCA CGTGTTACGC CGTCCTCTGG CTTAAGAGGG GTTGCGATAT ACATGCGTTG
TCTTTTCTCT ACGGCCAGAA GGCGTCTGTA GAGGTAGAAA AGGCGCAACT CGTCCTTAGG
AAGATAGATG AATTAGCCGC CGCCAGAGGC TGGGGGAGAG TTGTAGAACA TAGAGTAGTC
AATCTCTCTG CCTTGGGCGA GCTATGGCGT GGAACACAAC TGACAGATTC CTCTCTTTCT
GTAGAGAGGG AATATACGCC GACGGTTGTC GTCCCAATTA GAAATGTCGT AATGGCGGCG
GTTGCCACCG CATACGCCTA TACAATTAGG AATTTTACCG GGGCGAAGAC TTACGTTATT
TACGGGGCGC ATTACGACGA CATAAAACCG CGTGAAGACA CTTGGGAACC TCGATATCCG
GACTGCTCCC CCGAATGTAT AGAGGCTCTC CAGACGGCCT TTCGTATATG CCACTTCCGC
GCTGAGAGAG ACGTAGAGAT CTGGACTCCC TCTAGAGAGG GGCTTAAAAA GTCGCAACTC
CTTAAGATAT GTCATCAAGA GGTGGGCGAT TTGATATACG AAACCTGGTC TTGTTATAAA
TCTGGCGAAG CCCACTGCGG AGAGTGTGAA AGCTGTAGAA ATAGACATGC GGCATTTATA
GAAGCCGGAC TGCCCGACTG TACCACATAT TTAGCCCCGC CCGGCCCAGG CTTTGAAAGA
AGAGGTCGCT TCTATATACA TATAAGTTGT GTCAGACGAG GACAGACCTA A
 
Protein sequence
MATLVKPERP CRAVAVVSGG PDSTCYAVLW LKRGCDIHAL SFLYGQKASV EVEKAQLVLR 
KIDELAAARG WGRVVEHRVV NLSALGELWR GTQLTDSSLS VEREYTPTVV VPIRNVVMAA
VATAYAYTIR NFTGAKTYVI YGAHYDDIKP REDTWEPRYP DCSPECIEAL QTAFRICHFR
AERDVEIWTP SREGLKKSQL LKICHQEVGD LIYETWSCYK SGEAHCGECE SCRNRHAAFI
EAGLPDCTTY LAPPGPGFER RGRFYIHISC VRRGQT