Gene Pisl_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1850 
Symbol 
ID4617252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1676441 
End bp1676983 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content51% 
IMG OID639784934 
Producthypothetical protein 
Protein accessionYP_931341 
Protein GI119873334 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.147622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAGG GCAAGTTCTA CAGAGTTCTC CACCCACGTC CAACTCTTGT AATAGTTTCT 
AAATGTCCCA ACGGCAGACT TAACCTCATG CCTGCGTCGT GGAATACCCC AGTCTCTGAA
GAGCCGCCTA CTGTAGCCGT CGCCGTAGAA AAAAGCTCGT ATACCTACGA ATGTCTTAAA
CACCATAGAT ATGCTACGCT TAACGTCCTC CCGATTGAAG CTGCAGACTT AATATACAAG
CTGGGGAGCG TCAGCGGACG CAACGTCGAC AAGGCTACTG AATTTGGCGT AAAGTTTGAA
AACTCTGAAA AGATAGACGT GCCTCGCGTC GCAGGGGCTA TCGCTGGATA TGAGACTGAG
GTGTATAAAG AGGTTGAGGT GGGGGAGGTC GCCCTGTATA TATTCCACGT CTTATACACT
TGGGTTGCGC CTGGCGTAGC TGACCAATGG GGTTTTGACT TCAGAAGGGT AAACATCCCG
CTACACGGCG CGGGCCGTGC CTTCTATAGA GTAGATCCAC GGCCTGTCTT TGCCAAGAGG
TAG
 
Protein sequence
MYEGKFYRVL HPRPTLVIVS KCPNGRLNLM PASWNTPVSE EPPTVAVAVE KSSYTYECLK 
HHRYATLNVL PIEAADLIYK LGSVSGRNVD KATEFGVKFE NSEKIDVPRV AGAIAGYETE
VYKEVEVGEV ALYIFHVLYT WVAPGVADQW GFDFRRVNIP LHGAGRAFYR VDPRPVFAKR