Gene Pisl_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1798 
Symbol 
ID4617830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1633567 
End bp1633812 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content45% 
IMG OID639784882 
Product50S ribosomal protein L23P 
Protein accessionYP_931290 
Protein GI119873283 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID[TIGR03636] archaeal ribosomal protein L23 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.217622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.590833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC GGTTTGTAAT CACAGAGAAG ACTATCCGCC TTGCTGAGAA GGAGAATAAG 
ATAACTGTAG TTGTGGAAAG ATGGGCAACA AAGAAGCAGA TAGCCGATGA AATCCAGCGG
CTTTACAACG TCAAGGTTGA GAAGGTAAAT ACGCTCATAA CGCCCAGGGG CGAGAAGAAG
GCGTATGTAA AACTCGCCAA AGAATACAAC GCGATGGATC TATTAAGTCG GCTGGGCGTA
TTGTAA
 
Protein sequence
MIKRFVITEK TIRLAEKENK ITVVVERWAT KKQIADEIQR LYNVKVEKVN TLITPRGEKK 
AYVKLAKEYN AMDLLSRLGV L