Gene Pisl_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1705 
Symbolrps19p 
ID4618238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1543160 
End bp1543642 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content41% 
IMG OID639784787 
Product30S ribosomal protein S19P 
Protein accessionYP_931199 
Protein GI119873192 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0185] Ribosomal protein S19 
TIGRFAM ID[TIGR01025] ribosomal protein S19(archaeal)/S15(eukaryotic) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0143251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCAA AAGAAAAAGA ACAAGAAGCC GAAAAGGGAA AACAGGGGTG GATTATTCCC 
ACGGTTATAC CACCGGAAGA GTGGAGCACC TTTAGATATC GAGGAAAGAC TCTTGAGGAG
TTATTAAACA TGCCGATGGA CGAATTTATA AAACTCCTCC CAGCGCGACA GAGAAGAAGT
CTAAAGAGGG GGCTAAAGCC AGAACATAGA AAACTCCTCG AAAAAATAAG AAAGGCAAAG
AAACTAATGG CACAAGGCAA GAAAGTGGTA ATAAAAACCC ATTGTAGAGA TATGATAATA
TTACCGGAAA TGGTGGGCCT TACGATACAT GTCTATAATG GGATTACGTA TATCCCAGTC
TTTATATCGC CTTGGCATAT AGGACATTAT CTAGGCGAAT TTGCAATTAC GACGAAAATC
GTGCAACACG GCGAACCCGG CCTAAAGGCT ACGAGATCTT CATTACACAT AGCTGCTAAA
TAG
 
Protein sequence
MSSKEKEQEA EKGKQGWIIP TVIPPEEWST FRYRGKTLEE LLNMPMDEFI KLLPARQRRS 
LKRGLKPEHR KLLEKIRKAK KLMAQGKKVV IKTHCRDMII LPEMVGLTIH VYNGITYIPV
FISPWHIGHY LGEFAITTKI VQHGEPGLKA TRSSLHIAAK