Gene Pisl_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1685 
Symbol 
ID4617781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1526525 
End bp1526968 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content40% 
IMG OID639784767 
Producthypothetical protein 
Protein accessionYP_931179 
Protein GI119873172 
COG category[S] Function unknown 
COG ID[COG1371] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0257186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGTG GCAAGCCTGT TGATTATAGA TATGGCGAGC ATACAGCCGA TGTCTTAATA 
CAAGCATATG GATGTACTCT AGAGGAGGCG TTTAAAAACG CGGCAATCGC GCTGGCAGAA
TTGACCTATC ACACGGAAAA AGTAGAGCCT AGATACGCAA AGGAGATCAC GATAGATTAT
AACGACTTAG AAGGCCTATT ATTCAGGTGG ATAGACGAGC TGTTATTTCT CTTTGATACG
GAGAAATTTG CCATAAGCCG TGAAATCGTG TTAAACTTGG GAAAAAATGA CGTCTATTAC
ATAAAGGCCG TGTTATATGG AGAGCCTTAT GACATAGAGA AGCATGGATT TACTGGACTT
ATAGTTAAGG CTATGACATT CCACATGATG GAAATAAGAC AAATAGATGA CTATTGGATG
TTACAATACG TTGTAGACGT CTAG
 
Protein sequence
MKCGKPVDYR YGEHTADVLI QAYGCTLEEA FKNAAIALAE LTYHTEKVEP RYAKEITIDY 
NDLEGLLFRW IDELLFLFDT EKFAISREIV LNLGKNDVYY IKAVLYGEPY DIEKHGFTGL
IVKAMTFHMM EIRQIDDYWM LQYVVDV