Gene Pisl_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1496 
Symbol 
ID4617699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1363665 
End bp1364759 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content52% 
IMG OID639784579 
Productglycosyl transferase, group 1 
Protein accessionYP_930995 
Protein GI119872988 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.476221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGAGC TACCGGTAGT CTTGGTCAAC AACAACCCGC CGCACAGCGG CGTCGGGCGA 
TACGCCTACT CGCTCTACCG CTACTCCAGA AAGCTGGGCT ACAAGATAGC CATGATATCG
CTAGAGAGTT ATCTGTTTGA CAAAAACTAT AATGTGGCCA GGAAGATACA CCTAGGCGGC
TTGGTTTTAT ATATGAATTA TTTACGTATA AGCAACATAG TTTTCAACTC TGGTAAAATT
TATCATATTA CAAACAACGG CTATCTTACT AAGTTAATTC CCAAGATAAA ACAAGCTTCC
AACGCCAAAG TTGTAGTCAC GGTATTCGAC ACAATCCCCT TCTACCGGAG AGAGCTAGGC
GACATTCTCC TGGCAATCAG AGCATTCAGT AATATAAGAT ATGCCGACTT TATTATCATA
GACTCAAAGT TCACAGAGAT GAGCCTGCCC AGCTACCTGT CGCACATTCC AAGAAAGGTA
ATTCCGCTTG GAGTCGACCA CGACCTCTTC AAGCCGCGGG ATAAGGCCTG GGCACGGCAG
GAGCTCGGCC TACCGTCCAC CACGCCAATA CTGCTCAACG TAGGCACCGA GGAGCCGAGA
AAAAACATAC CAACACTGCT GAGGGCCTTC AGAGAAGTTG TGAAGAAGAT GCCCAAGGCG
AAGCTCATAA GGGTGGGCCC CATGGAGAGA CCCACGGCAA GGCTAATAAA GAGGCTCGGC
CTTTCAGACA ATGTACTCTA CACCAGGGTA GACGACCGGA AGTTCGCGTT GCTCTACAAT
GCGGCCGACG TCTACGTCCA CACCGCCTAC CTAGAGGGAT TCGGGCTACC GGTGCTAGAG
GCGATGGCCT CCGGGACGCC AGTGGTGGCG GGCAAAGCCG CCTCAGTGCC GGAGATTGCG
GGGGACGCCG CCATCCTCAC AGATCCCTTC GACGTAGAGG GAATCGCAGG AGAGGTTCTG
CGCGTCCTCA CAAACCGCGG TCTTAGAGAA GAGCTATCAC AGAGGGGATA CCAGAGAAGC
CTCAGATTTT CGTGGGAGAA AACTGCGCTT GAAACAATAG AGGTCTATAG CCGCTTGGTT
GAACATGGGC ATTAG
 
Protein sequence
MVELPVVLVN NNPPHSGVGR YAYSLYRYSR KLGYKIAMIS LESYLFDKNY NVARKIHLGG 
LVLYMNYLRI SNIVFNSGKI YHITNNGYLT KLIPKIKQAS NAKVVVTVFD TIPFYRRELG
DILLAIRAFS NIRYADFIII DSKFTEMSLP SYLSHIPRKV IPLGVDHDLF KPRDKAWARQ
ELGLPSTTPI LLNVGTEEPR KNIPTLLRAF REVVKKMPKA KLIRVGPMER PTARLIKRLG
LSDNVLYTRV DDRKFALLYN AADVYVHTAY LEGFGLPVLE AMASGTPVVA GKAASVPEIA
GDAAILTDPF DVEGIAGEVL RVLTNRGLRE ELSQRGYQRS LRFSWEKTAL ETIEVYSRLV
EHGH