Gene Pisl_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1489 
Symbol 
ID4618173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1357151 
End bp1357843 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content62% 
IMG OID639784572 
Productnucleotidyl transferase 
Protein accessionYP_930988 
Protein GI119872981 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.523541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCGG TGATTCTGGC GGGCGGATTC GGCAGGAGGC TCGCCCCCCT CACCAACGAG 
GTGCCCAAGC CCCTCGTGCC CGTGGCCGGG AAGCCCATCC TCGTGTGGCA GATCGAGTGG
CTGAAGAGGC AGGGCGTCAC AGACATAGTC CTCGCCGTGG GCTACCTACG CCACAAGATC
TTCGAGGCGC TGGGCGACGG CCGGAAATAC GGCGTCCGCC TCTTCTACAG CGTCGAGGAG
GAGCCCCTCG GCACCGGGGG TGCCATAAAA AACGCCGCCC CCTACCTCAC AGACGACATA
TTCATCGCGC TAAACGGCGA CATAATCACA GACATAGACA TAAGGCCGCT GACCGCCGCC
CTAGAGAAGG CAGACGCCGC CATAGCCCTC GTCCCCCTCA GAAGCCCCTA CGGCGTAGTG
GAGGTAGACG GCGAAGGCCG CGTGCTGGCC TTCAGAGAGA AGCCCGTGCT GGAGCACTAC
ATCAACGCCG GCGTCTACGC CATCAGGAAG GAGGCGCTAA GGGACCTCCC CGACAGAGGC
AACATAGAGG AGACCCTCTT CCCCAAGCTA GCCCAACAGG GCAGGCTGAG GGCCGTGGTC
TACAAAGACG CCTTCTGGCG CTCCATAGAC ACACACAAAG ACCTAGAGGA GGTAGAAAAA
ATGTTAAAAA CCAGGCCGGG AGGCGGGCCA TGA
 
Protein sequence
MRAVILAGGF GRRLAPLTNE VPKPLVPVAG KPILVWQIEW LKRQGVTDIV LAVGYLRHKI 
FEALGDGRKY GVRLFYSVEE EPLGTGGAIK NAAPYLTDDI FIALNGDIIT DIDIRPLTAA
LEKADAAIAL VPLRSPYGVV EVDGEGRVLA FREKPVLEHY INAGVYAIRK EALRDLPDRG
NIEETLFPKL AQQGRLRAVV YKDAFWRSID THKDLEEVEK MLKTRPGGGP