Gene Pisl_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1219 
Symbol 
ID4616414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1103575 
End bp1105029 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content51% 
IMG OID639784311 
Producthypothetical protein 
Protein accessionYP_930729 
Protein GI119872722 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAACT TCCCTATTAA CAAAGTTAAT GATTATGTGT GGGAGATTCC ACCTGGCGTA 
AAGCCGTGTC AAAAAGTTCC AGTCAGGATA TTTGCTGATA GTGTACTACT TGAAAAAATG
AAGGCCGACC TCACCATCGA GCAAGGCATT AACGTAGGCT GTCTCCCCGG CATTTATAAA
TACAGCATAA TTCTCCCAGA CGGACATCAG GGTTACGGCT TTCCCATAGG CGGCGTAGCT
GCAATTGACG CAGAAAACGG TGTAATTTCG CCTGGAGGCA TTGGTTACGA TATCAACTGT
GGGGTCCGCG TCTTAAGGAC TAATCTCACA GAGGAGGAGG TCAGGCCGAA GCTTAAGGAG
CTTGTAGACA CTATATTTAG ACTCGTGCCG CCTGGAGTGG GAGGCACAGG CCACCTCAAG
CTGTCGCCTG GCGAATTTGA AAGAGTACTT GCAGAAGGCG TAGAGTGGGC AGTACAAAAG
GGGTACGGCT GGGCTGAAGA TATGGAGTAT ATAGAGGAGA GGGGGTCTTG GAAGCTTGCA
GACCCCTCTA AAGTCAGCGA AAAGGCCAAG GCGAGGGGCA AAGATCAGTT AGGCACCTTA
GGCTCTGGGA ACCACTTCCT AGAGATTCAG GTAGTAGACA AGATTTTTGA CGAGAAAGTG
GCCAAAGTGT TTGGCATAGA GAGGGAGGGA CAAGTTCTCG TGATGATACA CACCGGGAGC
CGCGGCCTTG GACACCAGGT GGCAACAGAT TATCTTTTGA TTATGGAAAG AAATATGAGG
AGGTGGGGCT TAAATCTGCC TGACAGAGAG CTGGCAGCGG CTCCTCTCAA TGATAAAGTT
GCCGAGGATT ATATCAAGGC TATGGCCGCA GCCGCCAATT TTGCTTGGAC AAACCGCCAT
ATAATTATGC ATTGGGTTAG AGAAGCCTTT AAGAAGGTGT TTGGCTCTAT AGAGAAGGTG
GGACTGGAGC TTATCTACGA CGTTGCGCAC AACATCGCAA AACTTGAAGA ACACATAGTA
GACGACAAAG GCACAGTGAG AAGAGTGTGG GTACACCGCA AAGGAGCAAC TAGAGCCTTT
CCGCCCGGAA ACCCTGAGAT ACCTGCAAAA TATAGACAGG TGGGCCAGCC AGTTTTAATA
CCGGGTAGCA TGGGCACGGC TTCCTGGATA CTGGTAGGCA CCCCTGAAGC TATGAAGCTC
ACCTTCGGCA CGGCGCCGCA TGGCGCAGGC CGCGTCTTGA GCAGAGAGGC CGCCATTAGG
ATGTACCCGC CGCACAAGGT GCAAGAGGAG ATGACGAAGC GTGGTATCAT TGTGAGAAGC
GCGGAGACCG AGGTGATAAG CGAGGAGGCG CCGTGGGCCT ACAAGGACGT GGACAGGGTA
GTGGAGTCAA CCCACCAGGT GGGCTTTGCG AAGAAGGTAG TTAGGCAGAG GCCCATCGGC
GTGGTCAAGG GATAA
 
Protein sequence
MGNFPINKVN DYVWEIPPGV KPCQKVPVRI FADSVLLEKM KADLTIEQGI NVGCLPGIYK 
YSIILPDGHQ GYGFPIGGVA AIDAENGVIS PGGIGYDINC GVRVLRTNLT EEEVRPKLKE
LVDTIFRLVP PGVGGTGHLK LSPGEFERVL AEGVEWAVQK GYGWAEDMEY IEERGSWKLA
DPSKVSEKAK ARGKDQLGTL GSGNHFLEIQ VVDKIFDEKV AKVFGIEREG QVLVMIHTGS
RGLGHQVATD YLLIMERNMR RWGLNLPDRE LAAAPLNDKV AEDYIKAMAA AANFAWTNRH
IIMHWVREAF KKVFGSIEKV GLELIYDVAH NIAKLEEHIV DDKGTVRRVW VHRKGATRAF
PPGNPEIPAK YRQVGQPVLI PGSMGTASWI LVGTPEAMKL TFGTAPHGAG RVLSREAAIR
MYPPHKVQEE MTKRGIIVRS AETEVISEEA PWAYKDVDRV VESTHQVGFA KKVVRQRPIG
VVKG