Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1144 |
Symbol | |
ID | 4616968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1034980 |
End bp | 1035618 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639784240 |
Product | hypothetical protein |
Protein accession | YP_930658 |
Protein GI | 119872651 |
COG category | [S] Function unknown |
COG ID | [COG4021] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00000000000378102 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGATTCGC TCAAGAGACT GCTTTCTGAA AACCCGCGTC TTCTCGAAAT GCGTTATAGA GAGAGGGAGG CGGTATGCGA GCCCTCTTCG CCGCCTATCG CCGTGAGACT AGACGGTGTG GGGTTTGGGA AGAGACTGAA AGACTTCCCC GCGCCTAGGA GCAAACTTGT GCACGCCGCC TTAGTTGAAG TTGCGAAAAA TCTCGCAATG CAACACGGCG CCAGTTTTGT ACATGTTGTA AGCGACGAGA TAAACCTAGT GTTTCTCAAC GTAGTGCCGT ATGGAGGGAG GACTTTTAAA ATCATAAGCG TGTTGGCAGC TCAAGCCGCC GCGGAACTTA CGGCAAAATT AGGGCGCCCG CTGTATTTCG ACGGGAGAGT TATCAAACTA GACAGCTCTT GCGATGCTGC AAAATATATA CTATACAGAG CTAGAGTGGG GCTAAATAAC TACGTCGTCC AACTCGCACG AGCCACGGGG CTTATAAAGA CGCAGACGCC GCATATCGAA GAATTGTTGC CAAAGGTGGA GATAGGCGAT TTCGAACTGG CGTGGGGGAG TTTTATGAGT AAGGAAGACG GCTATTTAAA AAACTCAGAC CTCTGCCGCG CGGTGTCTAC ACTCTGCGAG ATATGCTAG
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Protein sequence | MDSLKRLLSE NPRLLEMRYR EREAVCEPSS PPIAVRLDGV GFGKRLKDFP APRSKLVHAA LVEVAKNLAM QHGASFVHVV SDEINLVFLN VVPYGGRTFK IISVLAAQAA AELTAKLGRP LYFDGRVIKL DSSCDAAKYI LYRARVGLNN YVVQLARATG LIKTQTPHIE ELLPKVEIGD FELAWGSFMS KEDGYLKNSD LCRAVSTLCE IC
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