Gene Pisl_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1144 
Symbol 
ID4616968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1034980 
End bp1035618 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content51% 
IMG OID639784240 
Producthypothetical protein 
Protein accessionYP_930658 
Protein GI119872651 
COG category[S] Function unknown 
COG ID[COG4021] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00000000000378102 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATTCGC TCAAGAGACT GCTTTCTGAA AACCCGCGTC TTCTCGAAAT GCGTTATAGA 
GAGAGGGAGG CGGTATGCGA GCCCTCTTCG CCGCCTATCG CCGTGAGACT AGACGGTGTG
GGGTTTGGGA AGAGACTGAA AGACTTCCCC GCGCCTAGGA GCAAACTTGT GCACGCCGCC
TTAGTTGAAG TTGCGAAAAA TCTCGCAATG CAACACGGCG CCAGTTTTGT ACATGTTGTA
AGCGACGAGA TAAACCTAGT GTTTCTCAAC GTAGTGCCGT ATGGAGGGAG GACTTTTAAA
ATCATAAGCG TGTTGGCAGC TCAAGCCGCC GCGGAACTTA CGGCAAAATT AGGGCGCCCG
CTGTATTTCG ACGGGAGAGT TATCAAACTA GACAGCTCTT GCGATGCTGC AAAATATATA
CTATACAGAG CTAGAGTGGG GCTAAATAAC TACGTCGTCC AACTCGCACG AGCCACGGGG
CTTATAAAGA CGCAGACGCC GCATATCGAA GAATTGTTGC CAAAGGTGGA GATAGGCGAT
TTCGAACTGG CGTGGGGGAG TTTTATGAGT AAGGAAGACG GCTATTTAAA AAACTCAGAC
CTCTGCCGCG CGGTGTCTAC ACTCTGCGAG ATATGCTAG
 
Protein sequence
MDSLKRLLSE NPRLLEMRYR EREAVCEPSS PPIAVRLDGV GFGKRLKDFP APRSKLVHAA 
LVEVAKNLAM QHGASFVHVV SDEINLVFLN VVPYGGRTFK IISVLAAQAA AELTAKLGRP
LYFDGRVIKL DSSCDAAKYI LYRARVGLNN YVVQLARATG LIKTQTPHIE ELLPKVEIGD
FELAWGSFMS KEDGYLKNSD LCRAVSTLCE IC