Gene Pisl_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1142 
Symbol 
ID4617297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1032703 
End bp1033479 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content46% 
IMG OID639784238 
Producthypothetical protein 
Protein accessionYP_930656 
Protein GI119872649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000000000112281 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAATTGTG ACATACCCAA GTGGCCTGTG GCCAAGGACG GCCTTAGACT AGGCGGCAGA 
TCTTGGATTA AGGCTGCAGA GGCCTTAGTT AAGTTAACTT CTACATTTCC AATGGCTATA
CTCTTGGGTA GAGCTGGCAT GGGCAAGTCC CAAGTGGCCT ACGAGGTGTG TAGAAGGACA
AACTGTATAT ATGTCGATTT GACAGAAGTC GGCGAGAGAA ATATAGCTAA CGTAGCGGCT
ATTGTGGCAT GGAGGATATT GGCTAGATTT GGGACTAGAG ACTCAAAAAA CAGGGTGGCG
GAGGTCTATA AGAAGTTTGG GTACGAGGGC ATTCTTTCGT TAGCTAAAGG CGACCCGGCG
TGGACGTTAA AAACTGCGCT TGAGTTAACT GGCTCGAGAA CCGTAATTGT ATTAGACGAG
CTTCTCCCCT CTGCGGAGGA TCCAAAATTT TTCGAAGTTG CGTATATACT CCACAGGATT
AGAAATATGC ACCTCTCTAA TGCGGCTTTT CTAGTCACCA TGTTGCCAGA GGTCTATGAG
AAAATTGTAG AAAGAATACC CCCGCTGGGC AACTTCTTTA TACATATCAC TGTGCAGTTG
CCAGATGTAA TACCTGAAGA CGAAGTTGAA GAAATAGTGT CTGTATATTG CCCAGAGAAG
GCGGATCTCG CCAGGAAAAT CCTAGCTGAG AGACCAGACG TCACAGTTAG AGAGCTGTTG
CTCGAGCTAA ACAATATACC ATCTAGGAGA TATGTAGAGC TTATCCCCGC AGATTAA
 
Protein sequence
MNCDIPKWPV AKDGLRLGGR SWIKAAEALV KLTSTFPMAI LLGRAGMGKS QVAYEVCRRT 
NCIYVDLTEV GERNIANVAA IVAWRILARF GTRDSKNRVA EVYKKFGYEG ILSLAKGDPA
WTLKTALELT GSRTVIVLDE LLPSAEDPKF FEVAYILHRI RNMHLSNAAF LVTMLPEVYE
KIVERIPPLG NFFIHITVQL PDVIPEDEVE EIVSVYCPEK ADLARKILAE RPDVTVRELL
LELNNIPSRR YVELIPAD