Gene Pisl_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1130 
Symbol 
ID4616919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1024439 
End bp1024939 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content46% 
IMG OID639784226 
Producthypothetical protein 
Protein accessionYP_930644 
Protein GI119872637 
COG category 
COG ID 
TIGRFAM ID[TIGR00267] conserved hypothetical protein TIGR00267 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000000160629 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGATATC TAGTCCTCGG CGTGATAGAT GGAATGATAA GCGCAGGTAC TCTCTCAGCC 
TCCCTAGTGT TTAAAGGCGG TACGCTAGAT CTAGGATTTG CACTCTCTCT TGCAATGGTT
GTGGCATCTA TAAATGCGCT TACTGTATTT GTGGCAGAGT TTTCACACCA AATGCGCGAG
GTGCGTGAGC TCTCTTACAA AGTCTCGCTA AGAGAAGAGA CGCGCGGGTG GACGCTTATA
CATAGCCGCG CTCTCTACTA CACATCTAAA TCAGCCGTAT ATAACTTCGT CGCATCATTT
CTAGGCGCAA CTATTGTGTT AATACCAGCT TGTTTCACAA CACATGCGGC TCTATACGCG
ATCATAGTCG CCGTTTTAAC TTCAAGTTAC CTACTTGCCG GCGGCTCCTG GAGGGAATTT
ATAGAATTTG CACTAATGTC TGCTGTCGCA GTTGGAGTGG GCATAGTTAT TGGTCTGACA
TTTCCCGTAT TTACAGCTTA A
 
Protein sequence
MRYLVLGVID GMISAGTLSA SLVFKGGTLD LGFALSLAMV VASINALTVF VAEFSHQMRE 
VRELSYKVSL REETRGWTLI HSRALYYTSK SAVYNFVASF LGATIVLIPA CFTTHAALYA
IIVAVLTSSY LLAGGSWREF IEFALMSAVA VGVGIVIGLT FPVFTA