Gene Pisl_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1125 
Symbol 
ID4618209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1021197 
End bp1022093 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content49% 
IMG OID639784221 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_930639 
Protein GI119872632 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0000135949 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTAGAGT TTATAATAAA CTACAGTGGA TATAGCGAAG ATGATAAACT AGCTATAGCA 
GTAGGCTTGT CTATGACGTT TAGACAAGTG TTAGTAGAGG CGAGGCCAAG CGCCGAGGCT
TTAGAAGCTA TAAAAAACGG CGTATGGGGC GCGCTTTTGA TAACGCCATG TCCCAGCGAT
CTTCCCTGTT TTAAAGATGT TGAAGACGCC GTCAACTACT CCGAGGTCTA TTCCACACCT
GTGGGATACG AGGGGCCTCT GCCCAAAGTC GCGAGGCGTA GAACTTCCAC ATTTAACAAA
CACTATCTCA AGCCATGGAG GTGGGCGCGA GGTGGAGAGA AAATGGAGGT GGGCCACTAT
CTTCTACCGC TTATGGCATG TTTATATAGA CAGCTTAAGC TATTAGACGC CGTGCCCATA
GTCGTATCTG ACGTAAGACT ACAGCCCAGC GGCGTCTCAC AACCTGACTA TATGGTGATA
CCCACGTGGC ACATTCCAAA CGAAGTTGCA GAAGTCGTTG ATGTATATAT GCCCCCGCTT
AAAGCTACGG CAATTGCCCT CGGAATATTA ACCGGCGGAT ACAACGCCGG GCCTGTAATT
GCTATAGCAA AAACGCGGGA TTACCTCGCG CCTAAAGTTG TTGAAATGGG CGGCTACGTC
GTAATACTTG ACGAAGCAAG CGATCCCTGC CAGTTGTTCT CCAGACGCAT CGTCGGCTAT
AGTTACAAGA GGAGACAATA TGTCGTAGAC CCCTCACTCT GTGATAAATG TGGCGAATGT
CTAAAGACGT CGTGTCCCGC CATCACGCCC TCTCCCCTCG GCGTGCCACA AATACTCCAG
ACGTGCACAG GATGTGGCGC ATGTGCGTTA TTATGTACAA GAGGAGCTAT ACACTAA
 
Protein sequence
MVEFIINYSG YSEDDKLAIA VGLSMTFRQV LVEARPSAEA LEAIKNGVWG ALLITPCPSD 
LPCFKDVEDA VNYSEVYSTP VGYEGPLPKV ARRRTSTFNK HYLKPWRWAR GGEKMEVGHY
LLPLMACLYR QLKLLDAVPI VVSDVRLQPS GVSQPDYMVI PTWHIPNEVA EVVDVYMPPL
KATAIALGIL TGGYNAGPVI AIAKTRDYLA PKVVEMGGYV VILDEASDPC QLFSRRIVGY
SYKRRQYVVD PSLCDKCGEC LKTSCPAITP SPLGVPQILQ TCTGCGACAL LCTRGAIH