Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1112 |
Symbol | |
ID | 4617474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1011686 |
End bp | 1012282 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639784206 |
Product | AMMECR1 domain-containing protein |
Protein accession | YP_930626 |
Protein GI | 119872619 |
COG category | [S] Function unknown |
COG ID | [COG2078] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.820877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCTCG GTCAGGCGCT TGTCTCTCAC GTACGTTCTG CCATGTTGGC TAAGCTCCGC GGCCAGCCCC TCCCCGAGTC TCACCCCCTT CTTTCTGGCA TGAAGAGTGG GGTGTTTGTC ACTGTGGAGG CTATTGTGAG GTCGGGTGGG TTTGAGAGGA GGGAGGTTAG GGGGTCGCTT GGGGTGGTAG AGCCGTTTAA AGACCTGGCG TATGACACGG CGAAGATTGC GGCTAAGCTT GTATATGCCA TCCCCCGGTT TACTGAGTTT GACCTTAGGA GGTCTGTCAT AGAGGTCACT CTTGTGGAAG AGCTTAGGGA GTGGGACGGC GGGCTTGCCG GCTTTGAGTG GGGGAGGGAG GGGGTGTACG CAGTGGCTGG CCAGCGGAGG GTTGTCGTAC TTCCACAGAC TATGATAGAG AGGAAGATCC TTGGCGAGGC TCTCTTGAGG TATATTGAGT CTATGGCGGG GCCCCCCGAG AGGTTGTATA GATTTTCTAC ACGTATTTTC TACGAGCTAC ACCCCGAGGG GGAGGTTATT GAACGTGAGC TTTGGAAATC TCGTGTTATT AAACAATTTC TAGAAGTTGT ACGTTAA
|
Protein sequence | MSLGQALVSH VRSAMLAKLR GQPLPESHPL LSGMKSGVFV TVEAIVRSGG FERREVRGSL GVVEPFKDLA YDTAKIAAKL VYAIPRFTEF DLRRSVIEVT LVEELREWDG GLAGFEWGRE GVYAVAGQRR VVVLPQTMIE RKILGEALLR YIESMAGPPE RLYRFSTRIF YELHPEGEVI ERELWKSRVI KQFLEVVR
|
| |