| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1107 |
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| Symbol | |
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| ID | 4616924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 994716 |
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| End bp | 996638 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639784201 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_930621 |
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| Protein GI | 119872614 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
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| TIGRFAM ID | [TIGR03675] arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.519523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTATTT TGTGGCGCGT GTCTTTTTCA GAAATTGAAA GTAGGGTGAG GTCTATTCTA
TCTGGCGCCG AGGTCTCTAG AGTTAGCTAC GAGGGGCCAA ACCTCTGTAT CTACGTGAAG
AGGCCCTCCG AGGCTCTCCT AGATATGGTC GGCGAGGTGG CCAAGACCCT TAAGAAGCGC
GTAGTTTTGA GGACTGAGGC CTCCAGCAGA CTGCCGGAGA AAAAGGCCTC CCAGATAATT
AGGGAAATCG TCGGCGAAGT TGACGACATT GTTTTTGAAG AAAGCGGCGA CGTCTATATC
TACCTCGCTA AGCCGATGCG GGAGAAGGAG ATAAGAGCTA TCGCGCGAGA GGTTTTTGTA
AGGACCGGCT GGAGGGCTGT GGTAGAGAGC GGGGTGCCTC GGGATAAGGT TAAGCTCCCC
GCCCACGAGA TCGTGGGAGT GCGTCAGATT TTCCACGGGG CCTACGCCCA GAGGAGGGAG
CTTATGGAGC ACTTGGCGAG GTATATACAC CAAGAGCCGG TGGTTAAAGA GGGGGCTATA
ACTGTGACTT TTCTCGGAGC CGCGATGGAA GTAGGCCGTA GCGCAATACT GGTCAGCACC
ACCGAGAGCA ACATACTGCT CGACTGCGGG CTGAAGCCCG GCCAATACGA CGAGGACTTC
CCCCTGCTCG ACGCCGTAGA TATCGATAGG CTAGACGCCG TTGTATTAAC CCACGCCCAT
ATGGACCACG TGGGCTGTCT CCCGTTTCTC TACAAGTACG GCTATAGAGG GCCTGTCTAC
ATGACCGACC CTACTAAGTA TCAAACGTTT ATACTCCTCA TGGATTACAT AGAGCTGAAG
GAGAGGGAGG GGCTGGAGCC GGCTTTCTCT AGGGCCGACG TGGAGTCCGT CATATACCAC
ACTATAACGC TGGACTATGA AGAGGTCACA GACATAGCGC CAGACGTCAA ACTCACTTTC
TACGACGCGG GCCACGAGAT TGGGTCGGCC ATGGCACATC TACATATAGG CAACGGGAGG
TATAACATCT TGTATACTGG GGATTTCAAA TACGGCAAGA CGAGACTTTT GAACCGCGCT
GTGTCTAAGT TCAAGAGGGT CGAAATGCTC ATAATGGAGT CTACCTACGG CGGTAGAGAT
GACGTGCAAC CGCCTAGGGT TGAGGCTGAG AACGCCTTGG CTAAACACGT GGCTGAGGCC
GTGTCGAGAG GCGGCAAGGT GCTGATCCCC GCCTTCAGCA CGGGGAGGGG CCAGGAGATC
CTCTACATCC TCAACAAAAT GATTGAGGGG GGTTTGATCC CCAGGGTGCC CGTCTATGTA
GATGGGATGA TTGTAGAAAC GCTCAACGCA TACCTCATGT ACCCCCACTA CCTAAACCCC
GAGGTTGCCG AGGAGATCTA CGGCGGGGTT AACCCCTTCA CTACCTCTGG GAGCGTGGTC
ATAGTGGACC GCGCCAAACG GGTGGAGGAT AGGATAAACC AAGTGGCTAA GATAGCCCAG
AGCGAAGAGC CTGCCGTCAT AATTGCGCCC CACGGCATGT TAAACGGCGG GCCTGTCGTG
GACTACTTCT CACAGCTGGC GCACGACCCT AGGAATAAGC TTGTGTTTGT CTCCTACCAG
GCGGAGGGGA CGCTTGGTAG AAGGATATTA AACGGCGAGC GGGAGTTCAC AATTAGAAGT
CTAGTTGGCG GAGAGTCTAA AGTTGAGGTA CGTATGGAGG TCGTATCTAT ACCTGGCTTC
TCAGGCCATA GCGATAGGAG AGAGCTTATG AAATATGTAG AACATATAGA GCCTAAGCCT
AAGAAAATAG TTTTAGTACA CGGGGAGCCT TCTAAAATCA TCAGCCTCGC CACGTCTATA
GAGCTGAAGT ATAAGATAAC TACAATTATA CCAAAAGTTG GCGAGAGGAT AAGAGCGTTG
TGA
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| Protein sequence | MCILWRVSFS EIESRVRSIL SGAEVSRVSY EGPNLCIYVK RPSEALLDMV GEVAKTLKKR
VVLRTEASSR LPEKKASQII REIVGEVDDI VFEESGDVYI YLAKPMREKE IRAIAREVFV
RTGWRAVVES GVPRDKVKLP AHEIVGVRQI FHGAYAQRRE LMEHLARYIH QEPVVKEGAI
TVTFLGAAME VGRSAILVST TESNILLDCG LKPGQYDEDF PLLDAVDIDR LDAVVLTHAH
MDHVGCLPFL YKYGYRGPVY MTDPTKYQTF ILLMDYIELK EREGLEPAFS RADVESVIYH
TITLDYEEVT DIAPDVKLTF YDAGHEIGSA MAHLHIGNGR YNILYTGDFK YGKTRLLNRA
VSKFKRVEML IMESTYGGRD DVQPPRVEAE NALAKHVAEA VSRGGKVLIP AFSTGRGQEI
LYILNKMIEG GLIPRVPVYV DGMIVETLNA YLMYPHYLNP EVAEEIYGGV NPFTTSGSVV
IVDRAKRVED RINQVAKIAQ SEEPAVIIAP HGMLNGGPVV DYFSQLAHDP RNKLVFVSYQ
AEGTLGRRIL NGEREFTIRS LVGGESKVEV RMEVVSIPGF SGHSDRRELM KYVEHIEPKP
KKIVLVHGEP SKIISLATSI ELKYKITTII PKVGERIRAL
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