Gene Pisl_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1105 
Symbol 
ID4617227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp992531 
End bp993376 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content46% 
IMG OID639784199 
Producthypothetical protein 
Protein accessionYP_930619 
Protein GI119872612 
COG category[R] General function prediction only 
COG ID[COG1355] Predicted dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCA GAAAACCCGC AGTGGCTGGG TATTTCTATG AGTCAGACCG CGAAAAACTT 
CTACAACAGC TAGAGTGGGC TATTAAACAC GAACTGGGAC CTAAGGCGCC GCAGATTCCT
AAATTAGGCG CCGAGACTTT GGGAGGCGTT GCGCCACACG CCGGCTATAT ATACTCGGGG
CCTGTGGCGG CTTGGGTATA TTCAGCTCTA GCAGGGTTTG GAAAACCAGA CGTCTTTATA
ATCATAGGCC CCAACCACTA TGGAATTGGA GCGCCTGTGG CAATTATGAA ATCCGGTGTC
TGGGAGACGC CTCTTGGACG TGTTGAAATA GACGGCGAAC TTGCGGAAAA AATAATGCGA
TATTTTAAAG AGCTAGAAGA CGACTTCCAC GCGTTTTCTA GAGAACATTC AATAGAGGTT
CAGATACCCT TTATACAATA TTTCTTTGGC GACGTGAAGA TAGTGCCTAT AACAATTTGG
AGACAGACGC TTTCAACTTC ACGCGAGCTT GGCAAAGCGC TTGCCAACGC CATAAGAGAA
TATGGAAGGA GGGCATACAT AATAGCAAGT AGCGATTTTA ACCACTACGA GCATCACGAC
ATAACAACTA AAAAAGACGA GATGGCCATA GGGAAAATAC TTCAACTAGA CGAGACAGGT
CTTTTCGAAG TGGCGTCTAA ATTTGACATA TCTATATGCG GCATTGGGCC AATAGGCGCG
CTTATTGTAG CAGCTAAAGA ACTAGGCTAT AAAAACGTCA CACTTCTTAA ACACGCCACC
TCAGGAGATA CAAGCGGCTA CAGAGAGGAG ACCGTGGGAT ATGCAAGCAT AATTTTCTAC
CGCTAA
 
Protein sequence
MRVRKPAVAG YFYESDREKL LQQLEWAIKH ELGPKAPQIP KLGAETLGGV APHAGYIYSG 
PVAAWVYSAL AGFGKPDVFI IIGPNHYGIG APVAIMKSGV WETPLGRVEI DGELAEKIMR
YFKELEDDFH AFSREHSIEV QIPFIQYFFG DVKIVPITIW RQTLSTSREL GKALANAIRE
YGRRAYIIAS SDFNHYEHHD ITTKKDEMAI GKILQLDETG LFEVASKFDI SICGIGPIGA
LIVAAKELGY KNVTLLKHAT SGDTSGYREE TVGYASIIFY R