Gene Pisl_1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1076 
Symbol 
ID4617408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp971420 
End bp971905 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content45% 
IMG OID639784172 
ProductXRE family transcriptional regulator 
Protein accessionYP_930592 
Protein GI119872585 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID[TIGR00270] conserved hypothetical protein TIGR00270 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATTGTG AAATATGTGG GAGGCCCATA GAGGGCGAGC CTATACCGAT AGAGGTAGAT 
AAAGCTGTAC TGTACGTATG TAAAAGTTGT GCAGCTAGAT ATGGTAAAAG AGTGTCGCCG
CAGCTACAAC AAGCAGTTCA AAAGAAGACG CCGCCACGGC CTAAATCTGC AACTCCCCGC
CTACAGTCTC TCGATGTGGA TCTTGTGGAA AATTTTGGAG AAGTTATTAA AAGAGCTAGA
GAGAATCTTG GCCTCTCTAG AGAGGCTCTT GCAGCTATGT TAGGCATTAA GGAGGCTGTC
TTAAGGAGGA TAGAATCCGG GCAGTTACAG CCCGATTTAG CATTAGCTAA GAAACTTGAG
AAAACTCTTG GAGTAAAACT ACTGATAAAC ATAGCTGAAG AAGGCGCCAC TTCAGGGAGT
GGTAGAATAG ATAGAGGTCT TACACTAGGC GAGGTAGCTG AGATTAGAGA TAGTGATGAG
AAATAG
 
Protein sequence
MYCEICGRPI EGEPIPIEVD KAVLYVCKSC AARYGKRVSP QLQQAVQKKT PPRPKSATPR 
LQSLDVDLVE NFGEVIKRAR ENLGLSREAL AAMLGIKEAV LRRIESGQLQ PDLALAKKLE
KTLGVKLLIN IAEEGATSGS GRIDRGLTLG EVAEIRDSDE K