| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1028 |
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| Symbol | |
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| ID | 4616827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 927761 |
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| End bp | 928960 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639784125 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_930545 |
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| Protein GI | 119872538 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000000000000302984 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGTAG ATAGTATACT TGCGTCGCGC ACAAAATTTA TGACTGCAAG TGAAATAAGA
GAGTTGCTCA AATGGATAAC CTCCGACGTT ATATCTTTTG GAGGTGGACT ACCTGATCCC
TCCACATTTC CCGTTGACGA AATTTCTAAA GTAGTAGCGT ACGTGTTAGA GGCCTATCCG
CAAAGAGCGT TACAATACGG CTCTACCGAG GGTGTCGCAG AACTCCGCGA AGAACTTGCT
AAGTTTGTAG ACTCTTACGC CGGCATTAAG GCAAGACCGG AAAATGTATT TATCACAGTA
GGTAGCCAAG AGGCTCTTGA GCTCTTGGGG CGTGTGTTTA TAGACCAAGG AGATGTAATT
ATTACAGAAA ACCCCACATA TATAGCAGCG TTACAAGCGT GGAGAGTATA CCAGCCGAGG
TTAATTGGCA TACCAATGGA CGAACATGGC ATGGTTGTAG AGAAACTGGA GGATACAATC
AGAAAACTCA AGGCAGAGGG CGCTAAAATA AAGTTTATCT ACACAATCCC AACGGCACAA
AACCCCAGCG GCTTAACAAT GTCTCAAGAG AGAAGAAAAT ATCTTCTTGA GATTGCTGAA
AAATATGATC TGTTGATAGT GGAGGACGAC CCATATTCCT ACTTTCTCTT CGAGCCTATA
CAAGTTACGC CTATTAAGAC ACTAGACAGA TCAGGAAGGG TGATATATCT CTCTACTGCA
TCTAAGATAT TCGCGCCTGG CTTCCGTTTG GGCTGGGTTA TAGCAGATAA GGAAATCCTA
GATTGGTTTA ATCTAGCTAA ACAATCCTTA AATCTACACA CTTCTACATT TGCACAATAC
GTACTCCTAG AGGGGCTCAG ACGCAATATA ATCTTAAAGA ATCTGCCACG CGTAAAAGAA
CTTTATAGAC GGAAACGCGA CGCCATGCTA ACCGCATTAG AGACTTATAT GCCGCCTGGT
GTAAGTTGGA CGAAACCAAG CGGCGGCATG TTTATATGGG CCACCGTGCC GCCACATATA
GATACGAGGG AGTTGCTAGT CACTGCAATC ACTAAATATA AGGTGGCTTT TGTGCCAGGC
CACGGCTTCT CTGTGGATCA ATCGCTTACA AACGCTATGC GTTTAAATTT CACCTATCCA
ACTTTCGAAC AAATTGAAGA GGGCATCCGC CGTCTTGCAA TGGCAATAAA AAGTGCATGA
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| Protein sequence | MKVDSILASR TKFMTASEIR ELLKWITSDV ISFGGGLPDP STFPVDEISK VVAYVLEAYP
QRALQYGSTE GVAELREELA KFVDSYAGIK ARPENVFITV GSQEALELLG RVFIDQGDVI
ITENPTYIAA LQAWRVYQPR LIGIPMDEHG MVVEKLEDTI RKLKAEGAKI KFIYTIPTAQ
NPSGLTMSQE RRKYLLEIAE KYDLLIVEDD PYSYFLFEPI QVTPIKTLDR SGRVIYLSTA
SKIFAPGFRL GWVIADKEIL DWFNLAKQSL NLHTSTFAQY VLLEGLRRNI ILKNLPRVKE
LYRRKRDAML TALETYMPPG VSWTKPSGGM FIWATVPPHI DTRELLVTAI TKYKVAFVPG
HGFSVDQSLT NAMRLNFTYP TFEQIEEGIR RLAMAIKSA
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