Gene Pisl_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1001 
Symbol 
ID4616711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp900170 
End bp900682 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content39% 
IMG OID639784099 
Productribosomal-protein-alanine acetyltransferase 
Protein accessionYP_930519 
Protein GI119872512 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID[TIGR01575] ribosomal-protein-alanine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.491632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0014892 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCAACAGC TAAAAACCAC GTTTAATAGC AGCAAAACGC ATCTCTGTGT GCTAAGGAGG 
TGTCAGTCGT CAGACATACC GGGTATATAT GAGGTTGAGG TAAAATCGTT TAAACAAGAT
GATATCTATA GCATAGAGCT ATTGAAATTT CTATGTTCCT ATTGTGGCGA GAATTCCTAT
GTTTATATAG TTGGCGGCAA AGTCGCGGGT TACATAATAA CATGTGTAGA GACTAATGCA
GCACATATAA TATCAATTGC TGTCGCGCCA GAATATAGAG GATTGGGCAT AGGTAAGATG
CTACTTTGTA CAGCACTTAA GCTCTTGACA GAATGTAAAA CCTCTGAAGT ATTTCTTGAG
GTTAGAGTTT CAAATACGCC TGCGTTAAGA CTTTACGAAT CCGCCGGTTT CCAACTGGTC
GAAGTATTGA AGAATTACTA CAGCGATGGT GAAGACGGAT ATAGGATGTC GCTGAAAGAT
AAGAAAAAAG CTCGCGAATT TTGTAAACAT TAA
 
Protein sequence
MQQLKTTFNS SKTHLCVLRR CQSSDIPGIY EVEVKSFKQD DIYSIELLKF LCSYCGENSY 
VYIVGGKVAG YIITCVETNA AHIISIAVAP EYRGLGIGKM LLCTALKLLT ECKTSEVFLE
VRVSNTPALR LYESAGFQLV EVLKNYYSDG EDGYRMSLKD KKKAREFCKH