Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1001 |
Symbol | |
ID | 4616711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 900170 |
End bp | 900682 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639784099 |
Product | ribosomal-protein-alanine acetyltransferase |
Protein accession | YP_930519 |
Protein GI | 119872512 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | [TIGR01575] ribosomal-protein-alanine acetyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.491632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0014892 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCAACAGC TAAAAACCAC GTTTAATAGC AGCAAAACGC ATCTCTGTGT GCTAAGGAGG TGTCAGTCGT CAGACATACC GGGTATATAT GAGGTTGAGG TAAAATCGTT TAAACAAGAT GATATCTATA GCATAGAGCT ATTGAAATTT CTATGTTCCT ATTGTGGCGA GAATTCCTAT GTTTATATAG TTGGCGGCAA AGTCGCGGGT TACATAATAA CATGTGTAGA GACTAATGCA GCACATATAA TATCAATTGC TGTCGCGCCA GAATATAGAG GATTGGGCAT AGGTAAGATG CTACTTTGTA CAGCACTTAA GCTCTTGACA GAATGTAAAA CCTCTGAAGT ATTTCTTGAG GTTAGAGTTT CAAATACGCC TGCGTTAAGA CTTTACGAAT CCGCCGGTTT CCAACTGGTC GAAGTATTGA AGAATTACTA CAGCGATGGT GAAGACGGAT ATAGGATGTC GCTGAAAGAT AAGAAAAAAG CTCGCGAATT TTGTAAACAT TAA
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Protein sequence | MQQLKTTFNS SKTHLCVLRR CQSSDIPGIY EVEVKSFKQD DIYSIELLKF LCSYCGENSY VYIVGGKVAG YIITCVETNA AHIISIAVAP EYRGLGIGKM LLCTALKLLT ECKTSEVFLE VRVSNTPALR LYESAGFQLV EVLKNYYSDG EDGYRMSLKD KKKAREFCKH
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