Gene Pisl_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0980 
Symbol 
ID4618137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp877954 
End bp879240 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content46% 
IMG OID639784079 
ProductGlu/Leu/Phe/Val dehydrogenase, C terminal 
Protein accessionYP_930499 
Protein GI119872492 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.681767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTACA TAACTGGTTC TTACATAATA AATGCGTTTC TTGAAAATAC ACTTATAACC 
ATAAGACGCG GCGTAGAATT GGCGGGATTG CCTGTAGAAC TATATGAGAT CTTGTCTAGG
CCTAGGCGTG TTTTGATTGT TAATATTCCT GTGAGGTTGG ATGGTGGTGG TTTTGAGGTG
TTTGAGGGTT ATCGTGTGCA GCATTGTGAT GTTCTCGGCC CGTATAAGGG TGGGGTTCGT
TTTCATCCTG AGGTTACTCT TGCCGACGAC GTCGCCTTGG CTATTTTAAT GACGTTGAAA
AATAGCCTAG CTGGCTTGCC GTATGGCGGC GCTAAAGGCG CAGTACGTGT AGACCCTAAG
AAACTCTCGC AGAGAGAACT TGAAGAGCTC TCTAGAGGAT ATGCCAGAGC CATAGCCCCC
CTCATAGGCG ACGTAGTCGA CATCCCAGCG CCTGACGTTG GGACAAACGC CCAAATCATG
GCGTGGATGG TAGACGAATA TTCAAAAATA AAGGGCTACA ACGTGCCCGG GGTATTCACC
TCAAAACCAC CAGAGCTATG GGGAAACCCA GTGAGAGAAT ACGCCACAGG CTTTGGAGTA
GCAGTAGCGA CAAGAGAAAT GGCAAAAAAA CTATGGGGCG GAATAGAAGG AAAAACAGTA
GCGATACAGG GTATGGGTAA TGTGGGGAGG TGGACAGCGT ATTGGCTAGA AAAAATGGGC
GCTAAGGTGA TAGCTGTGTC TGATATAAAT GGCGTAGCTT ATAGAAAGGA GGGACTTAAT
GTTGAATTGA TACAAAAAAA CAAGGGACTT ACAGGGCCTG CTCTCGTAGA ACTGTTTACG
ACAAAAGACA ATGCCGAATT TGTTAAAAAC CCAGATGCCA TATTTAAACT AGACGTCGAC
ATTTTCGTCC CCGCCGCTAT TGAGAATGTC ATTAGGGGTG ATAATGCTGG GCTTGTGAAG
GCTAGGCTTG TTGTTGAGGG TGCTAATGGC CCTACTACTC CTGAGGCTGA GAGGATTTTG
TATGAGAGGG GGGTTGTCGT AGTTCCTGAT ATCCTCGCCA ACGCCGGCGG CGTGATTATG
TCGTATTTAG AGTGGGTGGA GAATCTCCAG TGGTATATCT GGGACGAGGA GGAGACTAGA
AAGAGACTTG AAAACATAAT GGTAAACAAC GTCGAGAGAG TATACAAGAG ATGGCAGAGA
GAAAAAGGAT GGACAATGAG AGACGCAGCA ATAGTAACCG CATTAGAAAG AATATACAAC
GCCATGAAAA TAAGAGGGTG GATTTAG
 
Protein sequence
MVYITGSYII NAFLENTLIT IRRGVELAGL PVELYEILSR PRRVLIVNIP VRLDGGGFEV 
FEGYRVQHCD VLGPYKGGVR FHPEVTLADD VALAILMTLK NSLAGLPYGG AKGAVRVDPK
KLSQRELEEL SRGYARAIAP LIGDVVDIPA PDVGTNAQIM AWMVDEYSKI KGYNVPGVFT
SKPPELWGNP VREYATGFGV AVATREMAKK LWGGIEGKTV AIQGMGNVGR WTAYWLEKMG
AKVIAVSDIN GVAYRKEGLN VELIQKNKGL TGPALVELFT TKDNAEFVKN PDAIFKLDVD
IFVPAAIENV IRGDNAGLVK ARLVVEGANG PTTPEAERIL YERGVVVVPD ILANAGGVIM
SYLEWVENLQ WYIWDEEETR KRLENIMVNN VERVYKRWQR EKGWTMRDAA IVTALERIYN
AMKIRGWI