Gene Pisl_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0939 
Symbol 
ID4616867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp835892 
End bp836449 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content45% 
IMG OID639784037 
Productclass II aldolase/adducin family protein 
Protein accessionYP_930458 
Protein GI119872451 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.100017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATAG AGGAGGAGTT TCTAAGGTAC GTACGCCTAC TTTACGAAAG AGGTCACTTA 
ACTCTCTTGT CAGGCAATGT CTCGGTTCGT GCGGGAAATA GAGTATTAGT GACGCCTACG
TCACGTCCAA AGCCGTTTCT CACAGTCGAC GACTTAGTCT GGATAGACTT AGAGGGCAGA
GTTATTAAAG GTCGTCTAAT GCCGACAAGC GAGTGGCGAA TGCATGTGGC AGTATATAAG
AGACGGGGCG ATGTAAACGC CGTAGTGCAT ACACACGACG TCTTACCTAT AATTCTCGCC
GATAAGTTAG ACAGTTCGCT TCTTTCAGAA GCTGAGATAT ATCTCGGCTC AGAAATAGCT
ATAGTGGAGT ATTTCCAACC TGGCACCGTA GAGTTGGCAG AAAGTGTTGC AAAAGCACTA
GAAAGAAATA ATGTAGCTAT TTTAAAACGC CACGGAGTAG TAGCTGTAGG TAGAGACTTA
GCTGAGGCAG TAAATAGAGT AGAGACCCTA GTAGACTTAG CCAAGGCTGT GTTTTACAAA
CAACTTTTGG AGTTATGA
 
Protein sequence
MEIEEEFLRY VRLLYERGHL TLLSGNVSVR AGNRVLVTPT SRPKPFLTVD DLVWIDLEGR 
VIKGRLMPTS EWRMHVAVYK RRGDVNAVVH THDVLPIILA DKLDSSLLSE AEIYLGSEIA
IVEYFQPGTV ELAESVAKAL ERNNVAILKR HGVVAVGRDL AEAVNRVETL VDLAKAVFYK
QLLEL