Gene Pisl_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0938 
Symbol 
ID4616844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp834530 
End bp835891 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content45% 
IMG OID639784036 
Productgeranylgeranyl reductase 
Protein accessionYP_930457 
Protein GI119872450 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.129052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAGA AATTTGACAT TGTAATTGCC GGCGCCGGCA CTGCGGGAGC TTACGCATCT 
TACCTTCTTG CAAAAAGCGG ATTTAGAGTG GCCTTGTTAG AATCTAAAAG TGGCAATGAG
ATAGGAGTTA AGACTTGCGG CGATGGGCTA GGTCTTCACC ATGTGGAAAG GATGTCAAGA
TACCTTACTC CGAACTCCAA GGTTTTTCAG AACAAAATAG AGGGCGTGGA GCTTATAAGC
CCTGATGAAA AGACTAAACT GATAATTAAA GGAGAAGGCT ACGTCTTAGA TAGATTTGCC
TGGGGTAGGT GGCTTGTGGA AGAGGCTATT AGAGCTGGTG CAACACTTTA TGAGGGGCAC
ACGGCAACAT CTCCCATAGT TGAAAACGGC TCTGTAGTTG GAGTAAAGGC GGTAGAGAGG
AAAAGCGGCA TTGTTAAAGA ATTTAGAGCT AAGGTTACTA TAGACGCCAC AGGAGCTGCC
GCCGTTTTAA GAACTAAACT TTCAGGTTGG GCAGTCTCAG AGCCGTTGCA CCCAGAGGAT
GTCTCACACG CATATAGAGA GATTGTGTAT GTAGAAGAGC CTTTGGAAAA TCCACAGTAT
ATAAAGATAT ACCTAGATAT GGCAGTAGCT CCAGGCGGTT ATTGGTGGAT CTTCCCCCGT
AACGCTACAA TGTTGAACAT CGGGCTGGGG ATCTGGGGGG TTTTGAGACG AAACCCTAGA
GTTAACTATG AACAATACAT ATTGCCGCGG TTTAAAATTA GAGGCAAATA CCACATAGGC
GGCGGCTTTA TCCCAACTAG GAGACCATTA AAGACTTTAG TTGGCAATGG AATTGTAGTA
CTAGGCGACG CCGCTGCCGC AGTTAATCCA ATACATGGTG GCGGAATAGG GCAAGCTTTG
CTCACTGCTG AGTTGGCCTC AAAAGCGATA ACAAAGGCTT TTGAAACCGG CGATTTTTCT
GAAGAAACGC TGTGGGAGTA CAACTTGCTC TACATGAAGG AGTGGGGCTT TAGACAGGCA
CAACTTGACG TGCTACGGCT TATGCTTCAG ACATTAGACA ACGACGACCT TAACTTCGGA
CTTTCACGTA AAATATTAAA CGAAGACGAA ATTTACCACC TAGCCGCCAG GGGTACCGAT
CTGTCACTGA TTGACAAATT TAAAGTGTTG ATGCAATTTG TCGGCAGACC TGCACTATTG
AGAAAACTTA CTCTATCTAT TCAATATGCT AAGGAGATCG GAGATTTATA CCTAGCATAT
CCAAGAGAGA AAGCAGAATT AGATAGATGG TATACACAAG TAGTTAATAA ATACAACGAA
TACCGTAAAA AGATAGGGCT TGGGCCCTTG CCGACGGCGT AA
 
Protein sequence
MVEKFDIVIA GAGTAGAYAS YLLAKSGFRV ALLESKSGNE IGVKTCGDGL GLHHVERMSR 
YLTPNSKVFQ NKIEGVELIS PDEKTKLIIK GEGYVLDRFA WGRWLVEEAI RAGATLYEGH
TATSPIVENG SVVGVKAVER KSGIVKEFRA KVTIDATGAA AVLRTKLSGW AVSEPLHPED
VSHAYREIVY VEEPLENPQY IKIYLDMAVA PGGYWWIFPR NATMLNIGLG IWGVLRRNPR
VNYEQYILPR FKIRGKYHIG GGFIPTRRPL KTLVGNGIVV LGDAAAAVNP IHGGGIGQAL
LTAELASKAI TKAFETGDFS EETLWEYNLL YMKEWGFRQA QLDVLRLMLQ TLDNDDLNFG
LSRKILNEDE IYHLAARGTD LSLIDKFKVL MQFVGRPALL RKLTLSIQYA KEIGDLYLAY
PREKAELDRW YTQVVNKYNE YRKKIGLGPL PTA