Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0844 |
Symbol | |
ID | 4617892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 754574 |
End bp | 755329 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639783940 |
Product | proteasome subunit alpha |
Protein accession | YP_930363 |
Protein GI | 119872356 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.667486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.166899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTTAA AGACGCAACT TGGCCGTATC ATGTTCCCAC CTGCCATGGC GGGTTACGAT AGAGCAATAA CTATATTCTC ACCTGAGGGA AAAATATATC AAGTAGAATA CGCCGGAGAG GCTGTTAAAA GAGGTTGGCC TACCGTCGGC GTAAAGTGTA GAGGCGGCGT TGTATTAGTT GCAGAAAAGA GAAAAATATC CGCTCTGTTT GACCCATCTT CCTTAGAGAA AATTTATCTC ATCGATGAAC ATGTAGCTGC TTCTCCCTCA GGACTTCTGG CAGATGCCAG AATTTTAATA GACTATGCTC GCGACGTGGC GTTAAGCCAC AGGTTCATCT ATGATGAGCC TATCGACGTA GAGCTTCTCA CAAAGGCTAT ATGTAACTTA AAGCAACAAT ATACACAATT CGGTGGAGCT AGGCCTTTTG GTGTCGCGTT ATTAATTGCC GGAGTTGATA GACATGGCGC CCGTCTATTT CAGACAGATC CTTCAGGAGT TTACATCGGC TATTTTGCTA CAGCAATAGG TTCAGATGCC GGCACAATTT CGGAATACCT AGAAAAGAAC TATAAATTCG ACATTGATAT CAGAGAGTGC ATAGAGCTTG CAGCTAAAGC CTTGGCCTCC GCCGTAGAGA TTTCCGATAG CAACAATATC GAAGTTGCAT ATGCCACAAT TGAGGAGAGA AAAATACGGA AAATGACACA AGACGAAATT GCTACTTTAT TAACAAAACT ACCTAAGAAG ACCTAG
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Protein sequence | MYLKTQLGRI MFPPAMAGYD RAITIFSPEG KIYQVEYAGE AVKRGWPTVG VKCRGGVVLV AEKRKISALF DPSSLEKIYL IDEHVAASPS GLLADARILI DYARDVALSH RFIYDEPIDV ELLTKAICNL KQQYTQFGGA RPFGVALLIA GVDRHGARLF QTDPSGVYIG YFATAIGSDA GTISEYLEKN YKFDIDIREC IELAAKALAS AVEISDSNNI EVAYATIEER KIRKMTQDEI ATLLTKLPKK T
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