Gene Pisl_0844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0844 
Symbol 
ID4617892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp754574 
End bp755329 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content43% 
IMG OID639783940 
Productproteasome subunit alpha 
Protein accessionYP_930363 
Protein GI119872356 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID[TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.667486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.166899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTTAA AGACGCAACT TGGCCGTATC ATGTTCCCAC CTGCCATGGC GGGTTACGAT 
AGAGCAATAA CTATATTCTC ACCTGAGGGA AAAATATATC AAGTAGAATA CGCCGGAGAG
GCTGTTAAAA GAGGTTGGCC TACCGTCGGC GTAAAGTGTA GAGGCGGCGT TGTATTAGTT
GCAGAAAAGA GAAAAATATC CGCTCTGTTT GACCCATCTT CCTTAGAGAA AATTTATCTC
ATCGATGAAC ATGTAGCTGC TTCTCCCTCA GGACTTCTGG CAGATGCCAG AATTTTAATA
GACTATGCTC GCGACGTGGC GTTAAGCCAC AGGTTCATCT ATGATGAGCC TATCGACGTA
GAGCTTCTCA CAAAGGCTAT ATGTAACTTA AAGCAACAAT ATACACAATT CGGTGGAGCT
AGGCCTTTTG GTGTCGCGTT ATTAATTGCC GGAGTTGATA GACATGGCGC CCGTCTATTT
CAGACAGATC CTTCAGGAGT TTACATCGGC TATTTTGCTA CAGCAATAGG TTCAGATGCC
GGCACAATTT CGGAATACCT AGAAAAGAAC TATAAATTCG ACATTGATAT CAGAGAGTGC
ATAGAGCTTG CAGCTAAAGC CTTGGCCTCC GCCGTAGAGA TTTCCGATAG CAACAATATC
GAAGTTGCAT ATGCCACAAT TGAGGAGAGA AAAATACGGA AAATGACACA AGACGAAATT
GCTACTTTAT TAACAAAACT ACCTAAGAAG ACCTAG
 
Protein sequence
MYLKTQLGRI MFPPAMAGYD RAITIFSPEG KIYQVEYAGE AVKRGWPTVG VKCRGGVVLV 
AEKRKISALF DPSSLEKIYL IDEHVAASPS GLLADARILI DYARDVALSH RFIYDEPIDV
ELLTKAICNL KQQYTQFGGA RPFGVALLIA GVDRHGARLF QTDPSGVYIG YFATAIGSDA
GTISEYLEKN YKFDIDIREC IELAAKALAS AVEISDSNNI EVAYATIEER KIRKMTQDEI
ATLLTKLPKK T