| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0826 |
|---|
| Symbol | |
|---|
| ID | 4616865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 742672 |
|---|
| End bp | 743793 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639783922 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_930345 |
|---|
| Protein GI | 119872338 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1313] Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.0283607 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATTGGA CCTTTTATAG ACCTGACGCA ATTTCCATAT GGGAAAGCGC TGTTATAAGG
GAAAGGCTTG CGTGGTACTC TTCGGTAATG CGTAATAAGG CGCCTGCTAA ATATCATATA
GCAGCCAGGC TTGAGGCTCC ACAGGATTAT ACCGAGATGA ATGAAGAAGA GCTTTGGAAA
CTCCACAATG AATTAGGGCG TGTTTTTGAT GAGGAGTTAA GTCGCCAGAG AGAGCGGCCG
GACCCATCTC TTATAAAAAA GACACTACCG CCCGCATCGT TTCTTGACGT AAAAATAGAA
CTTGCTAAAA GACAGCTAAA GCATTGTATG CTCTGTGAGA GAAGATGCGG TATAGATAGA
ACCACAAAGA AAGGCGCTTG TCTTCTAGAT TACAAACCCC GGGTTGCAAG CTTCTTTCTC
CACCTGGGCG AAGAAGCCCC ATTGGTGCCT TCGGGCACAA TCTTCTTCAC AGGGTGCAAC
TTCCGTTGTG TATATTGCCA AAACTGGGAT ATCTCACAAT ATCCAGAAGC CGGAGTGGAA
GTTACAGCAG AAGCCTTAGC TGCTATACAA GTAAGGCTAA GAGAGGAGGG AGCCAAAAAT
ATAAATTGGG TTGGCGGAGA GCCTACTCCT AACATACCGT ATATTCTGGA ATCTATGAAG
ATTCTGGCAA CCAAAGGAGT CAATGTACCT CAGCTCTGGA ATTCAAACAT GTATATGACA
CCGGAGGGTC TTTCTCTTGT TCTCCACGTA ATTGACATAT GGCTTCCCGA CTTTAAATAC
GGTAATAACA TGTGTGCTAT GCGCTATTCG GTAGCTCCTA GATATTGGGA AGTGATTACT
AAAAACTTTT CTGTTATATG TAGGCGGCGG GAGGATATAA TAGTTAGACA TCTAGTCCTC
CCAGGCCATC TTGATTGTTG TACAAAACCA GTATTAAAGT GGCTGGCAGA AAACTGCCGC
CACGCCCTTG TAAACATAAT GGATCAATAC AGGCCAGAAT ACCTCGTATC TAAGCTGGAT
AAATATAGGG AGATTAGAAG AAGAGTTTCA GAAAGAGAAA TGGAGGAGGC CTATAGATAT
GCCGATTCAT TGGGTCTAAC ATGGAGAGAG GTCAGCAGAT AA
|
|---|
| Protein sequence | MYWTFYRPDA ISIWESAVIR ERLAWYSSVM RNKAPAKYHI AARLEAPQDY TEMNEEELWK
LHNELGRVFD EELSRQRERP DPSLIKKTLP PASFLDVKIE LAKRQLKHCM LCERRCGIDR
TTKKGACLLD YKPRVASFFL HLGEEAPLVP SGTIFFTGCN FRCVYCQNWD ISQYPEAGVE
VTAEALAAIQ VRLREEGAKN INWVGGEPTP NIPYILESMK ILATKGVNVP QLWNSNMYMT
PEGLSLVLHV IDIWLPDFKY GNNMCAMRYS VAPRYWEVIT KNFSVICRRR EDIIVRHLVL
PGHLDCCTKP VLKWLAENCR HALVNIMDQY RPEYLVSKLD KYREIRRRVS EREMEEAYRY
ADSLGLTWRE VSR
|
|---|
| |